Cronobacter sakazakii Sp291: CSSP291_16905
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Entry
CSSP291_16905 CDS
T02461
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
csz
Cronobacter sakazakii Sp291
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csz03019
]
CSSP291_16905
Messenger RNA biogenesis [BR:
csz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CSSP291_16905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
AGE87950
LinkDB
All DBs
Position
complement(3583762..3585702)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFVTLLVGMAMLVTLLGCSLSFFNAIQHKVTQRVASVASIVDNELVSQSPQM
MQSRLDEIMVPLDIVRIEFALGDKIVFSHTRPESYRESPFQTRARQLSVPLIKHPGMTLR
LTWQDPLANYYRSLLTTAPLTLAFALMVIIIYISVRWIKRQLAGQELLEGRAVRILNGER
GANARGNIHEWPTHASSALDVLLTELQRAGEQRSRMDTLIRAFAAQDAKTGLSNRIFFDN
QLATLLEEQDNAVTHGVVMMIRLPDFDMLRDSWGKTAVEEYLFTLINMLSTFIMRYPGAL
LARYFRSDFAVLLPHRTLKEADSIASQLLKAVGALPPTRMLDSSDMLHIGICAWRSGQTT
EQVMEHAEVATRNAVLQGGNGWAVYDSTLPDKGRGNVRWRTLIENALQRGGPRFYQKPAV
LRDGYVHHRELMCRIFDGEEEVLAAEYMPMVQQFGLAEQYDRQLITRVLPFLRFWPDETL
ALPVTVESLIRPPFQRWLRDTLMQCEKSHRKRILFELAEADVCQHLSRLQPVVRLIRALG
LRIAVVQAGLTVVGTAWIKALDVEIIKLHPGLVRDINKRTENQLFVQSLVEACNGTQTRV
FAAGVRTKSEWQTLVERGVTGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttaacgacgaaattctccgcttttgtcacgctgctggtcggtatggcgatgctg
gtgacgctgcttggctgctcactcagcttttttaacgccattcagcataaagtgacgcag
cgcgtcgcgtcggtggcttccattgtggataacgagctggtttcccagtctccgcagatg
atgcagtcacggcttgatgaaattatggtgccgctggatatcgtgcgaatcgagttcgcg
ctgggcgataaaattgtgttcagccatacgagacccgaaagctatcgggaatcgcccttt
cagacccgtgcccgccagctttctgttcctttgattaaacaccccggcatgacgctgcgt
ttaacctggcaggatccgctggctaactattatcgctccctgctgaccaccgcgccgctg
acgctggcttttgccctgatggtcatcatcatttatatctccgtacgctggatcaaacgc
cagcttgcaggccaggaactgctggaaggccgcgcggtgcgcatcctcaatggcgaacgt
ggcgcgaatgcgcgcggcaatattcatgaatggcccacccacgccagcagcgcgctggat
gtcttgctgaccgaattacagcgtgccggagaacagcgcagccgcatggatacgctgatc
cgtgccttcgcagcccaggatgccaaaaccgggctgagcaaccgcatcttctttgataat
caactggcgaccctgcttgaagagcaggataacgccgtgacgcacggcgtggtgatgatg
atccgcctgccggattttgacatgctgcgtgatagctggggaaaaaccgccgttgaagag
tatctcttcacgcttatcaacatgctttctacttttattatgcgctaccccggcgcgctg
ctggcgcggtatttccgcagcgattttgccgtactgttgccgcatcgcacgcttaaagaa
gccgacagcatcgccagccagttacttaaagcggtgggggcgctgccgccgacccggatg
ctggacagcagcgatatgctgcatatcggcatctgcgcctggcgcagcggacagacgacc
gagcaggtgatggaacacgcggaagtggcgacccgcaacgcggtattgcagggcggcaac
ggctgggcggtctatgacagtacgctgccggacaaagggcgcggtaacgtgcgctggcgc
actttaattgaaaacgcactgcagcgcggcggcccgcgtttttatcaaaaaccggccgta
ttgcgcgacggctatgtgcatcatcgcgaattaatgtgccgtatttttgacggtgaagaa
gaggtgctggcggcagagtatatgccgatggtgcagcagtttggtctggcagaacagtat
gatcgccagctgattacccgcgttctgcctttcctgcgcttctggccggacgaaacgctg
gcgctgccggtcacggtcgagtcgcttatccgtccgccgttccagcgctggctgcgcgat
acgctgatgcagtgcgaaaaatcgcatcgaaaacgcattctttttgaacttgccgaggca
gatgtttgtcaacatctcagccgtttacaaccggttgtgcgtttaatcagggcgcttggg
cttcgcatcgcggtggtccaggcgggattaacggtggtcggcacggcctggataaaagcg
ctggatgtggaaatcatcaagctgcatccggggctggtgcgggatatcaacaagcgcacc
gaaaaccagctttttgtacagagtctggtggaggcgtgcaacggaacgcagacgcgggtt
tttgccgccggcgtcagaaccaaaagtgaatggcagacgctggtcgagcgtggcgtgacg
ggaggtcagggcgatttttttgccgcctcgcaacctctcgatactaatgtgaaaaaatat
tcgcaaagatactcggtttga
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