Cronobacter sakazakii Sp291: CSSP291_17110
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Entry
CSSP291_17110 CDS
T02461
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSSP291_17110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csz03021
]
CSSP291_17110
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_17110
Enzymes [BR:
csz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSSP291_17110
Transcription machinery [BR:
csz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSSP291_17110
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSSP291_17110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
LPD39
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AGE87991
LinkDB
All DBs
Position
complement(3631769..3635992)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERSQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEAECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKINAKGEGMVLTGPKEAERLYRSG
QAELHARVKVRITEYEKDANGEFVSKTSLIDTTVGRAILWMIVPKGLPFSIVNQPLGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKAEIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRNGEEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVARNTLLNEQWCDILEANSVDSVKVRSVVTCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKSVVNSSGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVAGYIRFTDMIDGQTITRQTDELTGLSSLVVLDSSERTAGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEVAGIVSFGKETKGKRRLVITPVDGGDAYEEMIPKWRQLNVFE
GERVERGDVISDGPEAPHDILRLRGVQAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIMDAGSSEFLEGEQVEYSRVKIANRELEANGKVSATYMRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGNDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcgtcgccagacatgatccgttcctggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtaccttcaaaccggagcgcgatggtctgttctgcgcccgt
atctttgggccggtaaaagactatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatttgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgaactggcttccccgaccgcgcacatctggttcctgaaatcactg
ccgtcccgtatcggtctgctgctggatatgccgctgcgcgatatcgaacgtgtactgtat
tttgaatcttacgtggttatcgagggtggcatgaccaacctcgagcgcagccagatcctg
actgaagagcagtacctggacgcgctggaagagttcggtgacgagttcgacgcgaaaatg
ggcgccgaagctattcaggctctgctgaaaagcatggacctggaagccgagtgcgagcag
ctgcgtgaagagttgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
atcaagctgctggaagccttcgtacagtctggcaacaagccggagtggatgatcctgacc
gtgctgccagtgctgccgccggatctgcgtccgctggttccgctggatggcggtcgtttc
gcaacgtcggatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggcggcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtagacgccctgctggataacggccgtcgcggtcgtgcgatcaccggctccaac
aagcgtccgctgaaatcactggcagacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaagcgcgtggactactctggtcgttccgtaattaccgtaggtccgtac
ctgcgtctgcaccagtgcggcctgccgaagaaaatggcgctggaactgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgcgaccaccatcaaagccgccaagaaaatg
gttgagcgcgaagaagcggtcgtttgggatatcctggacgaagttatccgtgagcacccg
gtactgctgaaccgtgcgccgaccctgcaccgtctgggtattcaggcgttcgaaccggta
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcatacaacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctagaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgcgacaagattaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagcggaacgtctgtaccgctcaggc
caggctgaactgcacgctcgcgtaaaagttcgtatcactgaatacgaaaaagacgcgaac
ggcgagttcgtctccaaaaccagcctgatcgacaccacggttggccgtgccatcctgtgg
atgatcgtaccgaaaggtctgccgttctctatcgtgaaccagccgctcggtaaaaaagcg
atctccaaaatgctgaacacctgttaccgcattctgggcctgaagccgaccgttattttt
gctgaccagaccatgtataccggttttgcgtatgcagcacgttctggtgcgtccgttggt
atcgacgatatggttatcccggcgaaaaaagccgagatcatcgccgaagccgaagcggaa
gtggccgagatccaggagcagttccagtctggcctggttaccgcgggcgaacgctataac
aaagtcatcgatatctgggccgcggcgaacgatcgcgtatccaaggcgatgatggacaac
ctgcagaccgaaaccgttatcaaccgtaacggcgaagaagagcagcaggtttcctttaat
agcatctatatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gcgggtatgcgtggtctgatggcgaagccggatggctccattatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcgacccacggtgctcgt
aaaggtctggcggataccgcactgaaaaccgcgaactccggttacctgactcgtcgtctg
gttgacgtcgcgcaggatctggttgtgaccgaagacgattgcggcacgctggaaggcatc
accatgaccccggttatcgagggtggcgatgttaaagagccgctgcgcgatcgcgttctg
ggccgtgtaacggcagaagacgtgctgaagcctggcacggcggatatcctggttgcgcgc
aacacgctcctcaacgagcagtggtgtgacatcctggaagctaactccgtagacagcgtt
aaagttcgctccgtagtaacctgtgacaccgacttcggcgtctgtgcgcactgctatggt
cgtgacctcgcgcgtggccacatcatcaacaaaggtgaggccatcggcgttatcgcagca
cagtccatcggtgagccgggtacccagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatccgcctg
agcaacgcgaagtcggttgttaactccagcggtaagctggttgttacttcccgtaacacc
gagctgaaactgatcgacgaattcggccgtactaaagaaagctataaagtgccttacggt
gctgttatggcgaaaggtgacggcgagcaggtcgctggcggcgaaaccgtcgcgaactgg
gatccgcataccatgccggttatcaccgaagtggcgggttacattcgtttcaccgacatg
atcgacggccagaccattactcgtcagactgacgagctgaccggtctgtcttcgctggtg
gttctggattcttcagaacgtactgcgggcggtaaagatctgcgtccggcgctgaaaatc
gttgacgctaacggtaacgacgttctgatcccgggcaccgacatgccggctcagtacttc
ctgccaggtaaagcgattgttcagctggaagatggcgttcagatcagttccggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgc
gttgcggatctgttcgaagcgcgtcgtccgaaagagccggcaatccttgctgaagtggcg
ggtatcgtctccttcggtaaagaaaccaaaggcaaacgtcgtctggttatcaccccggtt
gacggcggtgacgcatacgaagagatgatcccgaaatggcgtcagctcaacgtgttcgaa
ggcgaacgtgtggaacgtggtgacgtcatctccgatggtccggaagcgccgcatgacatt
ctgcgtctgcgtggcgttcaggcggtgacccgttacatcgttaacgaagtgcaggacgtt
taccgtctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcatggacgcgggcagctccgagttcctggaaggtgagcaggtt
gaatactctcgcgtcaagatcgctaaccgcgaactggaagcgaacggcaaagtcagcgcg
acttacatgcgcgacctgctgggtatcaccaaagcgtctctggctaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgcgtgctcaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggcctgaaagagaacgttatcgtgggtcgtctgatcccggccggt
accggttacgcgtaccaccaggatcgtatgcgccgtcgcgctgcgggtgaactcccggca
gcaccgcaggtaactgcggaagacgcgtctgcaagcctggcagaactgctgaacgcaggt
ctgggcggcaacgacaacgagtaa
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integrated database retrieval system
