Cronobacter sakazakii Sp291: CSSP291_17310
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Entry
CSSP291_17310 CDS
T02461
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSSP291_17310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csz03019
]
CSSP291_17310
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_17310
Enzymes [BR:
csz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSSP291_17310
Messenger RNA biogenesis [BR:
csz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSSP291_17310
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSSP291_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGE88031
LinkDB
All DBs
Position
complement(3683014..3684843)
Genome browser
AA seq
609 aa
AA seq
DB search
MAQAEVYSQETLAKQVLQETFGYQQFRPGQATIIDAVLEGRDCLVVMPTGGGKSLCYQIP
ALVKTGLTIVVSPLISLMKDQVDQLLANGVAAACLNSTQSREEQQAVMAGCRTGQVRLLY
IAPERLMMDNFIDTLGYWDLAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMAL
TATADDTTRRDIVRLLGLDDPLIEISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLEHEVRASVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKAPGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQAPCGNCDICLDPPRRYDGLVDAQKAL
SAIARVEQRFGMGYVVEVLRGANNQRIRELGHDKLKVYGIGRDQSQEHWVSVIRQLIHLG
VVTQNIAQHSALQLTEAARPFLRGEAPLMLAVPRVAALKPRVAQKSYGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLGINGVGTRKLERFGRPFMTLIR
EHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtttacagtcaggaaacgctggctaagcaggttttacaggaaacc
tttggctatcagcagttccgtccaggccaggccaccattatcgacgcggtgcttgaaggg
cgcgactgcctggtggtgatgcccaccggcggcggcaaatcgctgtgttatcaaatcccg
gcgctggtgaaaaccggcctgaccatcgtggtttctccactgatttctctgatgaaagac
caggtcgatcagcttctggcgaacggcgtggccgcggcgtgcctcaattcgacgcagagc
cgcgaggagcagcaggcggtgatggcgggctgtcgtaccggccaggtgcgcctgctctac
atcgcgccggaaagactgatgatggataacttcatcgacacgctgggctactgggatctg
gcgatggtggcggtggatgaggcgcactgtatctctcagtggggccacgatttccgcccg
gaatacgcggcgctcggccagctgcgcgcgcgtttcccggcggtgccgtttatggcgctc
accgcgacggcggatgacacgacgcggcgcgatatcgtgcgtcttctgggccttgacgat
ccgctgattgaaatcagcagtttcgaccgcccgaacatccgctatatgctgatggaaaaa
ttcaaaccgctcgatcagctgatgcgctatgtgcaggagcagcgcggcaaatccggcatt
atctactgcaacagccgcgcgaaagtggaagacaccgccgcgcgtctgcaaagccgcggt
atcagcgccgccgcctatcacgcgggccttgagcatgaggtgcgcgcgtcggtgcaggag
aaattccagcgcgatgatttacagattgtggtggcgaccgtggcgttcggtatgggcatc
aacaaacccaacgtgcgctttgtcgtgcacttcgatattccccgcaatattgaatcctac
tatcaggagacgggtcgcgccgggcgcgacggcctgcctgccgaggcgatgctgttttac
gatccggcggatatggcgtggctgcgccgctgcctggaagaaaaggcgcctggcccgctg
caggatatcgagcgtcacaagctgaacgcgatgggcgcgttcgccgaggcgcaaacctgc
cgccgtctggtgctgctgaactatttcggcgaagggcgtcaggcaccgtgcggcaactgc
gatatctgcctcgatccgccgcgccgctacgatggcctggtggacgcgcaaaaagcgctg
tcggctatcgcgcgcgtggagcagcgcttcgggatgggctatgtggtggaagtgctgcgc
ggcgcgaacaaccagcgcatccgcgaactgggccacgacaagctcaaggtgtacggcatt
gggcgcgatcagagccaggagcactgggtcagcgttatccgccagcttattcatctgggc
gtggtgacgcagaacatcgcacagcattcggcgttgcagctgaccgaagccgcgcgcccg
ttcctgcgtggcgaagcgccgctgatgctggcggtgccgcgcgtcgcggcgctcaaaccg
cgcgtggcgcaaaaatcgtacggcggcaattatgaccgcaagctgtttgcgaaactgcgc
aaactgcgtaaggccatcgccgacgaagaaaacattccgccgtatgtcgtctttaacgac
gcgacgctgattgaaatggctgagcagatgccgctcagcccgggcgaaatgcttggcatt
aacggcgtcggcacccgtaaactggagcgcttcggcaggccgtttatgacgctcatccgc
gagcacgtcgacggcgacgacgaagagtag
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