Cronobacter sakazakii Sp291: CSSP291_17345
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Entry
CSSP291_17345 CDS
T02461
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03420
Nucleotide excision repair
csz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSSP291_17345
03430 Mismatch repair
CSSP291_17345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_17345
Enzymes [BR:
csz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSSP291_17345
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSSP291_17345
MMR (mismatch excision repair)
Other MMR factors
CSSP291_17345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGE88038
LinkDB
All DBs
Position
complement(3689906..3692068)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLMMVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGKKDDGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNGIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
AGRLGKELWTDGSDGEPISLYCAFNELDEARFVVNRIKVWQENGGALQDCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQACRQLLQEKALAGRAASALQRFLELIEALAHETIDMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADAWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIAELPEGCVEEVRLRASVSRPVSHKQLG
APIAQNDSGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFNGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaacgataaacagcgcgaagccgtagccgcg
ccgcgcagcaatatgctggtgctggcgggcgcgggcagcggaaagacgcgcgtgctggtg
catcgtatcgcctggctgatgatggtagaaaactgttcgccgtactccatcatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgcatcggccaactgatgggcacc
agccagggcggcatgtgggtcggcacgttccacggtctcgcccatcgcctgctgcgcgcg
caccatatggacgccaacctgccgcaggatttccagatcctcgacagcgaagatcagctg
cgcctgctcaagcgtctcatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcgatgtggtacatcaacggcaaaaaagatgacggcctgcgtccgcaccatattcag
agctacggcaacccggtagagcagacctggcagaaggtgtatcaggcgtatcaggaagcc
tgcgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgcccatgagctgtgg
ctcaacaaaccgcatatcctcaatcactaccgcgagcgcttcaccaatattctggtggat
gagttccaggacaccaacggcattcagtacgcctggatccgcctgctggcgggcgacacc
ggcaaagtgatgatcgtgggtgacgatgaccagtcgatttacggctggcgcggcgcgcag
gtggagaatattcagcgcttcctgaatgactttccgggcgcacagaccattcgtctcgaa
caaaactaccgctccaccaacaatattcttaacgccgcgaacgccctgatcgccaataac
gccgggcgtcttggtaaagagctgtggaccgacggcagcgacggcgaacctatctctctc
tactgcgcgttcaacgagctggatgaagcgcgctttgtggtcaaccgcatcaaggtgtgg
caggagaacggcggcgcgttgcaggattgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgttacaggcgagcatgccgtatcgcatttacggcggaatg
cggttcttcgaacgccaggagatcaaagacgcgctctcctacctgcgtcttatcgccaac
cgtaacgacgacgcggcctttgagcgcgtggtgaatacgccgacgcgcggcatcggcgac
cgcacgctggatgtcgtgcgccagaccgcgcgagaccgccagctgacgctctggcaggcg
tgccgccagctgttgcaggagaaagccctggccggccgcgccgccagcgctttgcagcgt
ttccttgaacttatcgaggcgctggcgcatgaaaccatcgatatgccgctgcacgtgcag
actgaccgggtaattaaagattccggcctgtggctgatgtacgagcaggaaaaaggcgag
aagggccaggcgcgtatcgaaaacttagaggaactggtgacggcgacgcgccagttcagc
tacaacgaagaagacgaagatctgatgccgctgcaggcgtttttgtcccacgccgcgctg
gaagcgggcgaagggcaggccgacgcctggcaggacgcggtgcagctgatgacgctgcac
tccgccaaagggctggaattcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccaagccagatgtcgctcgatgaaggcgggcgtctggaagaggagcgacgcctggcctat
gtgggcgttacccgcgccatgcagaagctgacgctcacctatgcggaaacccgtcgactg
tacggcaaagaggcgtatcaccgtccgtcgcggtttatcgctgagttgccggaaggctgt
gtggaagaagtgcgcctgcgcgcgagcgtcagccgtccggtcagccataagcagctgggc
gcgccgatagcgcagaacgactccggttataagcttggccagcgcgtgcgccacccgaaa
ttcggtgaaggcaccatcgtgaatctcgaaggcagcggcgaacatagccggttgcaggtg
gcgttcaacggtcagggcattaaatggctggtggccgcttacgcgcgcctcgaaaccgtc
tga
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