Chlamydia trachomatis A/HAR-13: CTA_0449
Help
Entry
CTA_0449 CDS
T00280
Symbol
pmpC
Name
(GenBank) polymorphic outer membrane protein
Organism
cta
Chlamydia trachomatis A/HAR-13
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ChlamPMP_M
Chlam_PMP
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AAX50683
UniProt:
A0A0H2X2G9
LinkDB
All DBs
Position
482131..487485
Genome browser
AA seq
1784 aa
AA seq
DB search
MKFMSATAVFAAALSSVTEASSIQDQIKNTDCNVSKVGYSTSQAFTDMMLADNTEYRAAD
SVSFYDFSTSSGLPRKHLSSSSEASPTTEGVSSSSSGENTENSQDSAPSSGETDEKTEEE
LDNGGIIYAREKLTISESQDSLSNQSIELHDNSIFFGEGEVIFDHRVALKNGGAIYGEKE
VVFENIKSLLVEVNIAVEKGGSVYAKERVSLENVTEATFSSNGGEQGGGGIYSEQDMLIS
DCNNVHFQGNAAGATAVKQCLDEEMIVLLAECVDSLSEDTLDSTPETEQTESNGNQDGSS
ETEDTQVSESPESTPSPDDVLGKGGGIYTEKSLTITGITGTIDFVSNIATDSGAGVFTKE
NLSCTNTNSLQVLKNSAGQHGGGAYVTQTMSVTNTTSESITTPPLVGEVIFSENTAKGHG
GGICTNKLSLSNLKTVTLTRNSAKESGGAIFTDPTSIPITDTPESSTPSSSSPASTPEVV
ASAKINRFFASTAEPAAPSLTEAESDQTDQTETSDTNSDIDVSIENILNVAINQNTSAKK
GGAIYGKKAKLSRINNLELSGNSSQDVGGGLCLTESVEFDAIGSLLSHYNSAAKEGGAIH
SKTVTLSNLKSTFTFADNTVKAIVESTPEAPEEIPPVEGEESTATEDPNSNTEGSSANTN
LEGSQGDTADTGTGDVNNESQDTSDTGNAESGEQLQDSTQSNEENALPNSNIDQSNENTD
ESSDSYTEEITDESVSSSSESGSSTPQDGGAASSGAPSGDQSISANACLAKSYAASTDSS
PVSNSSGSEEPVTSSSDSDVTASSDNPDSSSSGDSAGNSEEPTEPEAGSTTETPTLIGGG
AIYGETVKIENFSGQGIFSGNKAIDNTTEGSSSKSDVLGGAVYAKTLFNLDSGSSRRTVT
FSGNTVSSQSTTGQVAGGAIYSPTVTIATPVVFSKNSATNNANNATDTQRKDTFGGAIGA
TSTVSLSGGAHFLENVADLGSAIGLVPGTQNTETVKLESGSYYFEKNKALKRATIYAPVV
SIKAYTATFNQNRSLEEGSAIYFTKEASIESLGSVLFTGNLVTLTLSTTTEGTPATTSGD
VTKYGAAIFGQIASSNGSQTDNLPLKLIASGGNICFRNNEYRPTSSDTGTSTFCSIAGDV
KLTMQAAKGKTISFFDAIRTSTKKTGTQATAYDTLDINKSEDSETVNSAFTGTILFSSEL
HENKSYIPQNVVLHSGSLVLKPNTELHVISFEQKEGSSLVMTPGSVLSNQTVADGALVIN
NMTIDLSSVEKNGIAEGNIFTPPELRIIDTTTSGSGGTPSTDSESNQNSDDTEEQNNNDA
SNQGESANGSSSPAVAAAHTSRTRNFAAAATATPTTTPTATTTTSNQVILGGEIKLIDPN
GTFFQNPALRSDQQISLLVLPTDSSKMQAQKIVLTGDIAPQKGYTGTLTLDPDQLQNGTI
SVLWKFDSYRQWAYVPRDNHFYANSILGSQMSMVTVKQGLLNDKMNLARFEEVSYNNLWI
SGLGTMLSQVGTPTSEEFTYYSRGASVALDAKPAHDVIVGAAFSKMIGKTKSLKRENNYT
HKGFEYSYQASVYGGKPFHFVINKKTEKSLPLLLQGVISYGYIKHDTVTHYPTIRERNKG
EWEDLGWLTALRVSSVLKTPAQGDTKRITVYGELEYSSIRQKQFTETEYDPRYFDNCTYR
NLAIPMGLAFEGELSGNDILMYNRFSVAYMPSIYRNSPTCKYQVLSSGEGGEIICRVPTR
NSARGEYSTQLYLGPLWTLYGSYTIEADAHTLAHMMNCGARMTF
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatgtcagctactgctgtatttgctgcagcactctcctccgttactgaggcg
agctcgatccaagatcaaataaagaataccgactgcaatgttagcaaagtaggatattca
acttctcaagcatttactgatatgatgctagcagacaacacagagtatcgagctgctgat
agtgtttcattctatgacttttcgacatcttccggattacctagaaaacatcttagtagt
agtagtgaagcttctccaacgacagaaggagtgtcttcatcttcatctggagaaaatact
gagaattcacaagattcagctccctcttctggagaaactgatgagaaaacagaagaagaa
ctagacaatggcggaatcatttatgctagagagaaactaactatctcagaatctcaggac
tctctctctaatcaaagcatagaactccatgacaatagtattttcttcggagaaggtgaa
gttatctttgatcacagagttgccctcaaaaacggaggagctatttatggagagaaagag
gtagtctttgaaaacataaaatctctactagtagaagtaaatatcgcggtcgagaaaggg
ggtagcgtctatgcaaaagaacgagtatctttagaaaatgttaccgaagcaaccttctcc
tccaatggtggggaacaaggtggtggtggaatctattcagaacaggatatgttaatcagt
gattgcaacaatgtacatttccaagggaatgctgcaggagcaacagcagtaaaacaatgt
ctggatgaagaaatgatcgtattgctcgcagaatgcgttgatagcttatccgaagataca
ctggatagcactccagaaacggaacagactgagtcaaatggaaatcaagacggttcgtct
gaaacagaagatacacaagtatcagaatcaccagaatcaactcctagccccgacgatgtt
ttaggtaaaggtggtggtatctatacagaaaaatctttgaccatcactggaattacaggg
actatagattttgtcagtaacatagctaccgattctggagcaggtgtattcactaaagaa
aacttgtcttgcaccaacacgaatagcctacaggttttgaaaaactcggcaggtcaacat
ggaggaggagcctacgttactcaaaccatgtctgttactaatacaactagtgaaagtata
actactccccctctcgtaggagaagtgattttctctgaaaatacagctaaagggcacggt
ggtggtatctgcactaacaaactttctttatctaatttaaaaacggtgactctcactaga
aactctgcaaaggagtctggaggagctatttttacagatccaacgtctataccaataaca
gataccccagaatcttctaccccctcttcctcctcgcctgcaagcactcctgaagtagtt
gcttctgctaaaataaatcgattctttgcctctacggcagaaccggcagccccttctcta
acagaggctgagtctgatcaaacggatcaaacagaaacttctgatactaatagcgatata
gacgtgtcgattgagaacattttgaatgtcgctatcaatcaaaacacttctgcgaaaaaa
ggaggggctatttacgggaaaaaagctaaactttcccgtattaacaatcttgaactttca
gggaattcatcccaggatgtaggaggaggtctctgtttaactgaaagcgtagaatttgat
gcaattggatcgctcttatcccactataactctgctgctaaagaaggtggggctattcat
tctaaaacggttactctatctaacctcaagtctaccttcacttttgcagataacactgtt
aaagcaatagtagaaagcactcctgaagctccagaagagattcctccagtagaaggagaa
gagtctacagcaacagaagatccgaattctaatacagaaggaagttcggctaacactaac
cttgaaggatctcaaggggatactgctgatacagggactggtgatgttaacaatgagtct
caagacacatcagatactggaaacgctgaatctggagaacaactacaagattctacacaa
tctaatgaagaaaatgcccttcccaatagtaatattgatcaatctaacgaaaacacagac
gaatcatctgatagctacacagaggaaataactgacgagagtgtctcatcgtcctctgaa
agtggatcatctactcctcaagatggaggagcagcttcttcaggggctccctcaggagat
caatctatctctgcaaacgcttgtttagctaaaagctatgctgcgagtactgatagctcc
cccgtatctaattcttcaggttcagaagagcctgtcacttcttcttcagattcagacgtt
actgcatcttctgataatccagactcttcctcatctggagatagcgctggaaactctgaa
gaaccgactgagccagaagctggttctacaacagaaactcctactttaataggaggaggt
gctatctatggagaaactgttaagattgagaacttctctggccaaggaatattttctgga
aacaaagctatcgataacaccacagaaggctcctcttccaaatctgacgtcctcggaggt
gcggtctatgctaaaacattgtttaatctcgatagcgggagctctagacgaactgtcacc
ttctccgggaatactgtctcttctcaatctacaacaggtcaggttgctggaggagctatc
tactctcctactgtaaccattgctactcctgtagtattttctaaaaactctgcaacaaac
aatgctaataacgctacagatactcagagaaaagacacctttggaggagctatcggagct
acttctactgtttctctatcaggaggggctcatttcttagaaaacgttgctgacctcgga
tctgctattgggttggtgccaggcacacaaaatacagaaacagtgaaattagagtctggc
tcctactactttgaaaaaaataaagctttaaaacgagctactatttacgcacctgtcgtt
tccattaaagcctatactgcgacatttaaccaaaacagatctctagaagaaggaagcgcg
atttactttacaaaagaagcatctattgagtctttaggctctgttctcttcacaggaaac
ttagtaaccctaacgctaagcacaactacagaaggcacaccagccacaacctcaggagat
gtaacaaaatatggtgctgctatctttggacaaatagcaagctcaaacggatctcagacg
gataaccttcccctgaaactcattgcttcaggaggaaatatttgtttccgaaacaatgaa
taccgtcctacttcttctgataccggaacctctactttctgtagtattgcgggagatgtt
aaattaaccatgcaagctgcaaaagggaaaacgatcagtttctttgatgcaatccggacc
tctactaagaaaacaggtacacaggcgactgcctacgatactctcgatattaataaatct
gaggattcagaaactgtaaactctgcgtttacaggaacgattctgttctcctctgaatta
catgaaaataaatcctatattccacaaaacgtagttctacacagtggatctcttgtattg
aagccaaataccgagcttcatgtcatttcttttgagcagaaagaaggctcttctctcgtt
atgacacctggatctgttctttcgaaccagactgttgctgatggagctttggtcataaat
aacatgaccattgatttatccagcgtagagaaaaatggtattgctgaaggaaatatcttt
actcctccagaattgagaatcatagacactactacaagtggaagcggtggaaccccatct
acagatagtgaaagtaaccagaatagtgatgataccgaggagcaaaataataatgacgcc
tcgaatcaaggagaaagcgcgaatggatcgtcttctcctgcagtagctgctgcacacaca
tctcgtacaagaaactttgccgctgcagctacagccacacctacgacaacaccaacggct
acaactacaacaagcaaccaagtaatcctaggaggagaaattaaactcatcgatcctaat
gggaccttcttccagaaccctgcattaagatccgaccaacaaatctccttgttagtgctc
cctacagactcatcaaaaatgcaagctcagaaaatagtactgacgggtgatattgctcct
cagaaaggatatacaggaacactcactctggatcctgatcaactacaaaatggaacgatc
tcagtgctctggaaatttgactcttataggcaatgggcttatgtacctagagacaatcat
ttctatgcgaactcgattctgggatctcaaatgtcaatggtcacagtcaaacaaggcttg
ctcaacgataaaatgaatctagctcgctttgaggaagttagctataacaacctgtggata
tcaggactaggaacgatgctatcgcaagtaggaacacctacttctgaagaattcacttat
tacagcagaggagcttctgttgccttagatgctaaaccagcccatgatgtgattgttgga
gctgcatttagtaagatgatcgggaaaacaaaatccttgaaaagagagaataactacact
cacaaaggattcgaatattcttaccaagcatcggtatacggaggcaaaccattccacttt
gtaatcaataaaaaaacggaaaaatcgctaccgctattgttacaaggagtcatctcttac
ggatatatcaaacatgatacagtgactcactatccaacgatccgtgaacgaaacaaagga
gaatgggaagacttaggatggctgacagctctccgtgtctcctctgtcttaaaaactcct
gcacaaggggatactaaacgtatcactgtttacggagaattggaatactccagtatccgt
cagaaacaattcacagaaacagaatacgatcctcgttacttcgacaactgcacctataga
aacttagcaattcctatggggttagcattcgaaggagagctctctggtaacgatattttg
atgtacaacagattctctgtagcatacatgccatcaatctatcgaaattctccaacatgc
aaataccaagtgctctcttcaggagaaggcggagaaattatttgtagagtaccgacaaga
aactcagctcgcggagaatacagcacgcagctgtacctgggacctttgtggactctgtat
ggatcctacacgatagaagcagacgcacatacactagctcatatgatgaactgcggtgct
cgtatgacattctaa
DBGET
integrated database retrieval system
