Chlamydia trachomatis A/HAR-13: CTA_0556
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Entry
CTA_0556 CDS
T00280
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cta
Chlamydia trachomatis A/HAR-13
Pathway
cta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTA_0556 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cta03021
]
CTA_0556 (rpoA)
03400 DNA repair and recombination proteins [BR:
cta03400
]
CTA_0556 (rpoA)
Enzymes [BR:
cta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTA_0556 (rpoA)
Transcription machinery [BR:
cta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTA_0556 (rpoA)
DNA repair and recombination proteins [BR:
cta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTA_0556 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
AMIN-like
TerD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AAX50782
UniProt:
Q3KLJ0
LinkDB
All DBs
Position
complement(587256..588389)
Genome browser
AA seq
377 aa
AA seq
DB search
MSDSSHNLLYNKFELPESVKMSPVEGAVGGIDKVARFVADPLEKGMGHTLGSALRRALLI
GLEAPAIVSFSMTGVLHEYMAVEGIIEDVTNIVLNLKGSLLKKYPLQDCEGGRCSQKLRA
TISIDASDLAAAGGQKEVTLGDLLQEGTFEAVNPEHVIFTVTRPMQLEVMLRVAFGRGYS
PSERIVLEERGMNEIVLDAAFSPVVLVNYFVEDTRVGQDTDFDRLVLQVETDGRVAPKEA
VAFATQILSKHFSVFEKMDEKRIVFEEAISVEKENKDDILHKLVLGINEIELSVRSTNCL
SNANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLSQFGVGLDNVKE
KMKWYAEKIRLSKNTKG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagttcacacaatttactttataacaaatttgagttgcctgaatcggtgaag
atgtctcctgtggaaggggctgttggcggcattgataaagtagctcgatttgttgcagat
cccttggaaaaagggatggggcacaccttgggaagcgccttgcgacgtgctctgttaatc
ggcttggaagctcctgctattgtctctttctctatgacaggagttttgcacgaatatatg
gcggtagaggggatcattgaagatgttaccaatatcgttttgaatttgaaaggttcgttg
cttaaaaagtatcctctacaagattgtgaaggtggaagatgctctcaaaagttacgagct
acgatttctattgatgcatccgatttagctgctgctggtgggcagaaggaagttacttta
ggagatttgctacaagaaggaacttttgaagcggtcaatcctgagcacgtaatttttacg
gtcacgcgtccaatgcaacttgaggttatgttgcgagttgcttttggtagaggatactct
ccttctgaaagaatcgttcttgaagaaagaggcatgaatgagatcgttttagatgcggca
ttctctcctgttgttctggttaactattttgttgaagacacccgcgttggacaagataca
gatttcgatcgtttagtgttgcaagtggaaaccgatggtcgtgtggctcctaaagaagct
gtagcttttgctacacagattttgagtaagcatttttctgttttcgaaaaaatggacgag
aagagaatcgtttttgaggaagcaatctctgtagagaaagaaaacaaagacgatattctt
cataaattggttttaggcattaatgagatagaactttctgtacgatctacaaattgttta
tctaatgccaatatcgaaacgataggggaattggtaattatgccagagcctcgtctgtta
caatttagaaatttcgggaagaagtctctctgcgagattaagaataaactgaaagaaatg
aaattagagttaggcatggacctcagccagtttggtgttggtctggataacgttaaagaa
aaaatgaagtggtatgccgagaaaattcggttgagtaaaaataccaagggataa
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