Chlamydia trachomatis A/HAR-13: CTA_0668 Help Entry CTA_0668          CDS       T00280                                  Symbol rpoD Name (GenBank) RpoD   KO K03086   RNA polymerase primary sigma factor Organism cta  Chlamydia trachomatis A/HAR-13 Pathway cta02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cta00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     CTA_0668 (rpoD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cta03021]     CTA_0668 (rpoD) Transcription machinery [BR:cta03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CTA_0668 (rpoD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 TatA_B_E LpqV Motif Other DBs NCBI-ProteinID:  AAX50892 UniProt:  A0A0H2X1L9 LinkDB All DBs Position complement(696748..698463) Genome browser AA seq 571 aa AA seqDB search MRMDTLDSQAAEAAQEEEIQRKLEELVTLAKDQGFITYEEINEILPPSFDTPEQIDQVLI FLAGMDVQVLNQADVERQKERKKEAKELEGLAKRSEGTPDDPVRMYLKEMGTVPLLTREE EVEISKRIEKAQVQIERIILRFRYSTKEAVSIAQYLINGKERFDKIVSEKEVEDKTHFLN LLPKLISLLKEEDAYLEERLLALKDPALSKPDQARLNDELEKCRIRTQAYLRCFHCRHNV TEDFGEVVFKAYDSFLQLEQQINDLKARAERNKFAAAKLAAARRKLHKREVAAGRTLEEF KKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEK FEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEP TPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDGGESSFGDFLEDTAVESPAEATGYS MLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKM RHPIRSKQLRAFLDLLEEEKIGSGKIKSYKN NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt atgcgcatggatacgctagatagtcaagctgccgaggcagctcaagaagaagaaatccaa agaaagttagaagagttagtcactcttgctaaggatcaagggttcatcacgtatgaagaa atcaatgaaattcttcctccttctttcgatacgccagaacagatcgatcaagttttaatt tttctggcgggaatggatgttcaagtcctgaaccaagcagatgtagagcgacagaaagaa agaaaaaaggaagcaaaagagctagaagggttagctaagcgttctgaaggaacgccagat gatcctgttcgtatgtatttgaaagaaatgggaaccgttcctctacttactagagaggaa gaggtggaaatttctaagagaatagaaaaagctcaagttcaaatagaaagaattattttg cgcttccgctattctacaaaggaagctgtgtcgatcgcgcagtatctcatcaatggtaaa gaacgatttgataagatcgtttctgaaaaggaagtagaagataagacacacttccttaat cttctgcccaaactcatctctttattgaaagaagaagatgcatatttggaagagcggctt cttgctttaaaagatccggcgttgtccaagccagatcaggcaaggttgaatgacgagctg gagaaatgccgtatccgtacacaagcgtatttgcggtgtttccattgtcgtcataatgtg acggaagatttcggagaggtggtttttaaggcttatgattcattcttgcagttagaacag caaatcaatgatttgaaagcgcgagctgaaagaaataagtttgccgcagcgaaacttgct gcagcgcggcgaaagcttcacaagcgtgaggtagcggctggacgcactcttgaagagttt aaaaaagatgtgcggatgttacagcgttggatggacaagagccaggaagccaaaaaagag atggtggagtccaacttacggttggtaatttctatcgcgaaaaaatataccaacagaggg ctgtctttcttggatctgattcaagaaggtaatatgggcttgatgaaggctgttgagaag tttgagtatcgtagaggatacaagttttcaacttatgccacgtggtggattcgtcaggct gttacacgggctattgcggatcaagcacgaacgatccgcattcctgttcacatgatagaa accatcaataaagtgcttcgtggagctaaaaaattaatgatggaaacagggaaagagcct actccggaagagctcggagaggaattgggctttactccagatcgtgttcgagaaatctat aaaatagctcaacacccgatttctttgcaagcagaggtcggagatggtggggagagctct tttggagatttcttggaagatactgctgttgaatctccagcggaggcaacagggtattcc atgttaaaagataaaatgaaagaagttttgaaaacgcttacggaccgtgagcgttttgtt ttgattcatcggtttggtcttcttgatggtcgtcccaagactttggaagaggtgggttct gcattcaatgtaacacgagagcggattcgccaaattgaagctaaagctttacgaaagatg cgtcatcctatccgttccaaacagttgcgagcgttcctagatctattggaagaagaaaaa attggttcgggtaagattaaaagttataaaaattag

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