Clostridium taeniosporum: BGI42_00120
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Entry
BGI42_00120 CDS
T04957
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ctae
Clostridium taeniosporum
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctae03400
]
BGI42_00120 (addA)
Enzymes [BR:
ctae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BGI42_00120 (addA)
DNA repair and recombination proteins [BR:
ctae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BGI42_00120 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_12
AAA_30
DUF2059
T2SSE
DUF5301
Motif
Other DBs
NCBI-ProteinID:
AOR22237
UniProt:
A0A1D7XFV5
LinkDB
All DBs
Position
24426..28160
Genome browser
AA seq
1244 aa
AA seq
DB search
MSGTKWTDEQLKAITTRDCNLLVAAAAGSGKTAVLVERIIKIITNEENPIDIDKLLVVTF
TSAAAAEMRERIANAISKKLDENPTSKNLQKQLTLLNRSNIMTIHSFCLDVIKNNFHKID
LDPSFRICDQTEGILLKMEIIDELFDDKYDEEDVEFLRFVEAFSNYKSDNPLKELVLSLY
NFTMAGPWPKKWLEESAEEFDIDTLEELDRTNWITVLKDSIKIELEGYIKMMQKAIELIE
ETDGLEPYFEGFSSELDLIVNAYNNIDSDLSNLYNSLNLISFKRLKTIKKSTVSDENVQS
LVKQIRDQVKKKISALIEGTFIDAPEKMLENIKKSYSYIKQLTKLTSEFIDRFNAKKKEK
NILDFNDLEHLCLKILIEENEKHQIVPSTIAYKFKDYFDEVLVDEYQDSNSVQEAIIELV
SRKNSDIPNVFMVGDVKQSIYKFRQAKPELFIDKYNNYSLNDGLNRKIQLYKNFRSREEV
INGVNYIFKSVMSKTIGELEYTDAEALNLGANFPENKNNEEVVGGPIEVHILDKSNKEEV
NEEPKLKEDEEEIGDINLEARIIVNRINELMSKKDGTTFRVLDKDTGEYRDLKYKDIVIL
LRATKNWSEVLLDELGLAGIPVYSDTGSGYFESIEIRTIMSLLKVIDNPMQDVPMLSLLS
SPIIGLSAEELSDIRLVDNERYFYENIIRITTEKLISKELQEKCEYILASIDKWRRKSIY
MPIDEFIWYLYMDTAYYGYVGAMPNGVLRQANLKVLFQRARQFSDTSFKGLFNFINFINK
LTKSSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFLAGTGKNFNLMDLNNKILYHEE
LGLGPEYINLENRTSITTLPKEAIKKRMKLETLSEEMRILYVAFTRAKEKLIITGAVRNT
EKSIEKWINSSVLDKEVVLPYEVSKGKSYLDWIGMALCKHKDGEILRRKLGFSSEMCKDD
LSNWKISIWNKNELNIDDEIEENKDDDEMKISILDRDIDSKIKNEVYRRLSYEYEFKEST
KLTSNVSVSDLKRRNMEEDIDTLEIFDFKEDTDEKKDVITPKFLQEEKGLSAAERGTAIH
FVMKKIDLNRVNTLIEIKKQLNELYDEEFILQEEYSSINPYRILNFFKSDLGKKMLQIYN
EGGKIYREVPFYTEISSLKVDESLPEKYSKEKIRLQGIVDCFFKYDDKLILLDYKTDYVE
NEEEFKEKYKLQLDYYSQAIFKMIGKKVDKKYLYSFYLEKEILI
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaacaaaatggactgatgaacagctaaaagcaattacaactagagattgtaat
ttattagttgcagcagcagcaggttcaggaaaaacagctgttttagtagaaagaattata
aagataattactaatgaagaaaatcctatagatattgataaacttttagttgttacattt
acaagtgcagcagcagcagagatgagagaaagaatagctaatgcaatatcaaaaaaatta
gatgaaaatccaacatctaaaaatcttcaaaaacaattaactttgttaaacaggtctaat
attatgactattcactctttttgtttagatgtaataaaaaataattttcataagatagat
ttagatccatcatttagaatatgtgatcaaactgaaggcatacttttaaagatggagata
atagatgaattatttgatgacaaatatgatgaagaagatgtggaatttttaagatttgtt
gaagcatttagtaattataaaagtgataatccattaaaagaattggttttgagtttatat
aattttactatggcagggccatggccaaagaaatggttagaggaatcggcagaagaattt
gatatagacacattagaagaattagatagaactaattggataactgtattaaaagatagc
ataaaaatagagttagaaggctatataaagatgatgcaaaaagctattgagttaattgaa
gaaactgatggtttagaaccttattttgaaggatttagtagtgagttagatttaatagtt
aatgcttataacaatatagattctgatttaagcaatttatataattcattaaatttaata
agttttaagagattaaaaactataaagaaaagtactgtaagtgatgaaaatgtacaaagt
ttagttaaacaaattagagatcaggttaaaaagaaaatatcagctttaattgaaggtact
tttatagatgctccagaaaaaatgcttgagaatataaagaaatcttattcatatataaaa
caattaacaaaacttacttctgagtttatagacagatttaatgcaaagaaaaaagagaag
aacatactagatttcaatgatttagagcatttatgcttaaagattttaattgaagaaaat
gagaagcatcagatagtaccatcaacaatagcttataaatttaaagattattttgatgaa
gttcttgtagatgaatatcaagattctaatagcgttcaagaagctataatagagttagta
tcaagaaaaaattcagatattcctaacgtgtttatggttggagatgtaaagcaaagtata
tataaatttaggcaagcaaaaccagaattatttatagataaatacaataattattcttta
aatgatggacttaacagaaaaattcaactttataaaaattttagaagtagagaagaggta
ataaatggggttaattatatatttaaatcagttatgtctaaaactataggagaattagaa
tatactgatgctgaggctttaaatttaggtgcaaattttcctgaaaataaaaataatgaa
gaagtagtaggtggaccaattgaggttcatattttagataaaagtaataaggaagaagtt
aatgaagaacccaaattaaaggaagatgaagaggaaataggtgacataaatttagaggct
agaattatagtaaacagaattaatgaattaatgtctaaaaaagatggaactacatttaga
gttctagataaagatacaggtgaatatagggacttaaaatataaagatatagtaattctt
ttaagagcaactaaaaactggtcagaagtattattagatgaactaggattagcaggaata
ccagtatattcagatacaggatcagggtattttgaatcaattgaaataagaactattatg
tcattattaaaagtaatagataacccaatgcaagatgttcctatgctttcattattaagt
tctcctattatagggttaagtgcagaagaacttagtgatattaggcttgtagataacgaa
aggtatttttatgaaaatataattagaattactactgaaaaattaatttctaaagagtta
caagaaaaatgcgagtatatattagctagtattgacaaatggagaagaaaatcaatatac
atgcctatagatgagtttatatggtatctatatatggatacggcttattatggttatgta
ggtgctatgcctaatggagtgctaagacaagcaaatttaaaggtattattccaaagagca
agacagttttcagataccagctttaagggattatttaattttatcaatttcataaataag
ttaactaaatcatcaggtgatatgggaagtgctaaaatattaggggaaaatgaagatgtt
gttagaattatgagtattcataaaagtaagggattagaatttccagtagtatttttagct
ggaacaggtaaaaactttaatttaatggatttaaataataagatactttatcatgaggaa
ttaggtttaggtccagagtatattaatttagagaatagaactagtataaccactttacct
aaagaagcaattaaaaaacgaatgaaattagaaacattatctgaagaaatgagaatttta
tatgtagcattcactagagcaaaggaaaaattaattataactggagctgtaagaaataca
gaaaaatctattgaaaaatggattaattcatcagtgttagataaagaggttgtattgcca
tatgaagtgtcaaaaggaaaatcatatttagattggattggaatggctttatgtaagcat
aaagatggtgagatacttagaagaaagctaggattttctagtgaaatgtgtaaagatgat
ttatcaaattggaagataagcatttggaataagaacgaattaaatatagatgatgaaata
gaagaaaataaagatgatgatgaaatgaaaatctcaatcttagatagggatatagattct
aaaatcaaaaatgaagtttatagaagattaagttatgaatatgaatttaaagaatctact
aaacttacaagtaatgtatctgtatcagatttaaaaagaagaaatatggaagaagatata
gatactcttgaaatttttgatttcaaggaagatactgatgaaaaaaaagatgtaattacg
cctaaatttcttcaagaagaaaaggggttatcggcagctgaaagaggaacagctattcac
tttgtaatgaaaaaaatagatttaaatagagtaaatacattaattgaaatcaaaaaacaa
ttaaatgaattatacgatgaggaatttatattacaagaagaatatagctctattaatcca
tacaggatattaaatttctttaagagtgatttaggaaagaaaatgttacaaatatataat
gaaggtggaaaaatttatagagaagttccattttatactgaaataagtagtttaaaagta
gatgagtctttaccagaaaaatattctaaagaaaaaataagattacaaggtatagtagac
tgtttctttaaatatgatgataagttaattttattagattataagactgattatgtagaa
aacgaggaagaatttaaagaaaaatataaacttcaattagactattatagtcaggcaata
tttaaaatgataggaaaaaaagttgataaaaaatatctatattcattctatttagaaaag
gagatcttaatataa
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