Clostridium taeniosporum: BGI42_02155
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Entry
BGI42_02155 CDS
T04957
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGI42_02155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctae03021
]
BGI42_02155
03019 Messenger RNA biogenesis [BR:
ctae03019
]
BGI42_02155
Transcription machinery [BR:
ctae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BGI42_02155
Messenger RNA biogenesis [BR:
ctae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BGI42_02155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
DUF5855
Spore_III_AA
NACHT
Sputnik_MCP_1st
OB_RNB
AAA_22
AAA
AAA_25
SAP
Motif
Other DBs
NCBI-ProteinID:
AOR22586
UniProt:
A0A1D7XGW9
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All DBs
Position
439775..441238
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AA seq
487 aa
AA seq
DB search
MTKQVYESMTLVELKDIAKKLEIKNISKYKKNELIDEILKKSPNTIQKEGVVLREKISSK
VRSNGSFNNNSNGSFNNSSNNSSNNKGNFRNNEEKLKQEKLNNMINESNTAKGILEILEN
NNFGFLRCKNYLTSSEDIYVSPSQIRRFNLRTGDEVQGKVREAKEGEKFKALLFVEGVNG
EQPEKAIGRKYFETLTPIYPKERLRLETSDEKDLSSRLMDIVCPIGKGQRGIIVAPPKAG
KTTLLKKVAQNISKNYPDIKLIVLLIDERPEEVTDMKRSINGEVIYSTFDEEPQNHAKVS
RIVLERAKRMVEQGKDVVILMDSLTRLSRAYNLTITPTGRTLSGGLDPGALIMPKKFFGA
ARNVEEGGSLTILATALVETGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKS
GTRKEDLIFSKEEQEVAYTIRRVMYRDGNVEDVTENLIGMLSKTSSNEEFINVFKKAEFE
KRKRNNK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaagcaagtatatgaaagcatgactttagttgaattaaaggatattgcaaaaaaa
ttagaaataaaaaatatatcaaaatataaaaaaaatgaattaatagatgaaattttaaaa
aaatctcctaatacaatacaaaaagaaggtgttgtattaagagaaaagatatcttcaaaa
gtaagatctaatggtagctttaataataattctaatggtagttttaataatagttctaat
aatagttctaataataaaggtaattttagaaataatgaagaaaagttaaaacaagaaaaa
ttaaataacatgataaatgagtctaatacagctaaagggattttagaaatactagaaaat
aataattttggatttttgagatgtaaaaattatttaactagcagtgaagatatttatgtt
tcaccttctcaaattagaagatttaatttaagaacaggtgatgaggtacaaggaaaagta
agggaagcaaaagaaggagaaaaattcaaggctcttttatttgttgaaggagtaaatggt
gaacaacctgaaaaagctataggtaggaaatattttgaaacattaacgcctatatatcca
aaagaaaggctaagattagagacttctgatgaaaaggatttatcatcaaggcttatggat
atagtttgtcctattggtaaaggacaaaggggaattatagttgctccacctaaagctggt
aaaactacattattaaaaaaagttgctcaaaatatatcaaaaaactatccagatataaaa
ttaatagtacttcttattgatgaaagaccagaagaagttactgatatgaaaagatcaata
aatggggaagtgatatattctacatttgatgaagaacctcaaaatcatgcaaaagtatct
agaatagttttagaaagagctaaaagaatggttgaacaaggaaaagatgttgtgattctt
atggatagtttaactagattatcaagagcttataatttaacaataacaccaacaggaaga
actttatcaggtggattagacccaggtgctttaataatgcctaagaaattttttggagca
gcaagaaatgttgaagaaggtggaagtttaactattttagccacagcacttgtagaaaca
ggatcaagaatggatgatatgatatttgaagaatttaaaggaacaggaaatatggaagtt
catcttgatagaaaactacaagaaagaagaatattcccagctattgatatatataaatca
ggaactaggaaagaagatttaatattctctaaagaagaacaagaagtagcatatacaata
agaagagttatgtacagggatggaaatgtagaagatgtaacagaaaatcttataggaatg
ttatctaaaacttcaagtaatgaagaatttataaatgtatttaaaaaagctgaatttgaa
aaaagaaaacgcaacaataagtaa
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