Clostridium taeniosporum: BGI42_02780
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Entry
BGI42_02780 CDS
T04957
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ctae
Clostridium taeniosporum
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctae03009
]
BGI42_02780
Enzymes [BR:
ctae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BGI42_02780
Ribosome biogenesis [BR:
ctae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BGI42_02780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
N6_N4_Mtase
Cons_hypoth95
Methyltransf_15
TRAM
PrmA
Methyltransf_32
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_12
PCMT
UPF0020
Methyltrans_SAM
FtsJ
Ubie_methyltran
Acetyltransf_14
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AOR22698
UniProt:
A0A1D7XH59
LinkDB
All DBs
Position
567019..568374
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AA seq
451 aa
AA seq
DB search
MKRGSEVKVKIEKTKFPSTGIGHLEDKPVYVKNTYPGQVITGRVKKNRKEYTELKLTGVE
ERADYEIDPLCPHFGFCGGCSSQTLSYDKQLEVLEDEVKDLFKEDEVTTGKFLGVLGSSE
QWEYRNKMEFTFGDEEKGGDLSIGMHMRGKAFGIMTVDQCKIVDEDYRKIIRLTADYFGK
QDLPYYRVMKREGYLRHLVVRKAQNTGEILVNLVTTTQIDFDLSEYVELLKSQEYKGTLV
SVLHTENNSFSDAVIPEKVNVLYGRDYIQEKLLGLNFKISPFSFFQTNTKGAESLYSLVR
EFMGSSENKVVFDLYCGTGTIGQIVAPNAKKVVGIELIEEAVEAAKENAKLNGLDNCEFL
AGDVAEIIKTVKDKPDIIILDPPRSGVHPKALDYVIKFNAPEIIYVSCNPKTLVTDLKVL
VEKGYKIIQTQVKDMFPNTPHVETVVKLLKK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaggaagcgaagtaaaagttaaaatcgaaaaaacaaaattcccatcgacaggt
atagggcatttagaagataaaccagtgtatgtaaaaaatacatacccaggtcaagtgata
acaggaagagttaaaaagaatagaaaagagtatacagaattaaaattaacaggtgtagaa
gaaagagcagattatgaaatagatccactatgtcctcattttggattttgcggaggatgc
tcatctcaaactttatcttatgataagcaactagaagttttagaagatgaagtaaaagat
ttgtttaaagaagatgaggtaactacaggaaaatttttaggtgtattaggaagctcagag
caatgggaatatagaaataagatggaattcacatttggtgatgaagaaaaaggtggagat
ctttctattggaatgcatatgagaggtaaagcttttggaataatgacagtagatcaatgt
aaaatagttgatgaagactatagaaaaataataagattaactgcagattattttggaaaa
caagacttaccatattatagagttatgaaaagagagggatatttaagacatcttgtagta
agaaaagctcaaaatacaggggaaatattagtaaatcttgttacaactacacaaatagat
tttgatttaagtgaatatgttgaattattaaaatctcaagaatataagggtactttagta
tcggttcttcatactgaaaataattcgttttcagatgcagtaataccagaaaaggtaaat
gtattatatggaagagactatatacaagaaaaattattaggtcttaattttaaaatttca
ccattttcattcttccaaacaaatacaaagggagctgaaagtctttattcattagttaga
gaatttatgggaagttcagaaaataaagttgtatttgatctttattgtgggacaggaaca
ataggtcaaatagttgctcctaatgcaaaaaaagttgtaggaatagaacttatagaagaa
gcagttgaagcagcaaaagaaaatgctaaattaaatggattggataattgtgagttcttg
gcaggagatgtagcggaaataataaaaacggtaaaagataaaccagatataataatatta
gatccgccaagaagtggggttcatcctaaagctttagattacgtaattaaatttaatgca
ccagaaataatatatgtttcatgtaatccaaagactttagtaacagaccttaaagtgttg
gtagagaagggttataaaataatacaaacacaagtgaaagatatgttcccgaacacacct
cacgtggagacagtcgtgaagctattaaagaaatag
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