KEGG   Clostridium taeniosporum: BGI42_04100
Entry
BGI42_04100       CDS       T04957                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ctae  Clostridium taeniosporum
Pathway
ctae02020  Two-component system
ctae02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ctae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BGI42_04100
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BGI42_04100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctae03021]
    BGI42_04100
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ctae02035]
    BGI42_04100
Transcription machinery [BR:ctae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BGI42_04100
Bacterial motility proteins [BR:ctae02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BGI42_04100
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Tnp_4
Other DBs
NCBI-ProteinID: AOR22947
UniProt: A0A1D7XHX7
LinkDB
Position
852484..853212
AA seq 242 aa
MCNLQDNNVKEQIVKDYIPLVKYIASRIMIGKNKYMEYEDLVSYGIIGLMDAISKYDPSK
GMKFSSYASIRIKGAIIDQIRKNRPITKGAMDKLNRYNNAIESLQNKLLREPNILEIAEY
LELSLEEVSQIENYINHISIVSLENIIFSDDEEVNLLGIIEDKNSPSPELELQEKEKLEV
LSDAIKLLKEKEQLILNLYYYERLTLKQIGAILSVSESRVCQLHARSISNLREAMKKLHY
ID
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtgcaatttacaagataacaatgtaaaagaacaaatagtaaaagattatatcccttta
gttaaatatatagcttctaggatcatgataggtaagaataaatatatggagtatgaagac
ttggttagttatgggataatagggcttatggatgctattagtaaatatgatcctagtaag
ggaatgaaattttcatcatatgcttctattagaataaaaggagctataatagatcaaata
cgaaaaaatagaccaataactaaaggcgctatggataaattaaatagatataataatgcc
attgaatcattacaaaataaattattaagagaacctaatattttagaaatagcagaatat
ttagagttatctttagaagaggtttcacaaatagaaaattatataaatcatatatctata
gtatctttagaaaatataattttttctgatgatgaagaagttaatcttttaggaataata
gaagataagaatagtcctagtccagaattggaattgcaagaaaaagagaagttggaagta
ttatcagatgctataaaacttttaaaagagaaagaacaattaatacttaatctatattat
tacgaaagattaacacttaaacaaataggagctatattatcagtatctgaatcaagagta
tgtcaattacatgcaagatctattagtaatttaagagaagctatgaaaaaattacattac
attgattaa

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