Clostridium taeniosporum: BGI42_05920
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Entry
BGI42_05920 CDS
T04957
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGI42_05920 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctae03019
]
BGI42_05920 (rny)
Messenger RNA biogenesis [BR:
ctae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BGI42_05920 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
OmpH
T3SSipB
KH_2
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AOR23296
UniProt:
A0A1D7XJ08
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All DBs
Position
1245744..1247285
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AA seq
513 aa
AA seq
DB search
MNWIFIIIVDLFILLVLGILLYKMIQRVSKEKVESLENEAQDVLERAKREAEALQKETIL
EAKEEVHKLRNDFEKESRERRNEIQRLERRVIQKEESLDKKSDILEKREEKINQRMLDID
QVEAKVQELYTQRREELERISSLSSEEARKILLDEIKREISHDAALMIKEIESKAKEEAD
KKAREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSSFDPIRREVARIALEKLIVDGRIHPARIEEMVERAVKDVENDIKDEGEQAT
LETGINGLHPELIRLLGRLKYRTSYGQNVLKHSIEVSYLAGLMASELGLDVTLAKRAGLL
HDIGKAVDQEQEGPHALIGGDLTKKYHEQPLIINAVAAHHGDVEMQSLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIIVKPDKVDDAGTAEL
ARNLVKSVEEQLEYPGQIKINVIRETRTVEFAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaattggatttttataataatagtagatttatttatattattagtattaggaatacta
ctttataaaatgatacaaagagtatcaaaagaaaaagttgagtctcttgaaaatgaggca
caagatgttttagaaagagctaaaagagaagctgaagctcttcaaaaagaaacaatactt
gaagctaaagaagaggttcataagttaagaaatgactttgaaaaggaatctcgagaaaga
agaaatgagattcaaagacttgagagaagagttattcaaaaggaagaatcacttgataaa
aaaagtgatatactagaaaaaagggaagaaaagattaatcaaagaatgcttgatatagat
caagtagaagcaaaagtacaagaactttatacccaaagaagagaagaattagaaagaatt
tcatctctttctagtgaagaagctcgcaaaattttgttagatgaaattaaaagagaaatt
tcacatgatgctgcattgatgataaaagaaatcgaaagtaaagctaaggaagaagcagat
aaaaaagcaagagaaataattactactgctatccaaagatgtgctgcagatcatgtgtct
gaaactactgtgcacgttgttgcgctaccaaatgatgaaatgaagggtagaataataggt
agagaaggaagaaacattagaactttagaaacattaacaggagtagatttaataatagat
gatactccagaggcagtcattctttcaagttttgatccaataaggagagaagttgcaaga
atagcacttgaaaagttaatagtggatggtagaatacatccagcaagaatcgaagagatg
gttgaaagagcagtcaaagatgtagagaatgatataaaagacgaaggggaacaagcgacc
ctagaaactggcataaatggattacatccagaacttataagactacttggtagattaaag
tatagaactagttatggtcaaaatgtattaaaacattccatagaagtctcatacttagct
ggtttaatggcttcagaattaggtttagatgttactctagctaaaagagcaggattatta
catgatataggtaaagctgtagatcaagagcaagaaggacctcatgcgttaatcggagga
gacttaacaaagaaatatcatgaacaaccattaataataaatgctgtagcagcccatcat
ggagatgtggaaatgcaatctttagaagctgtattggttcaagcggcagatgctatatca
gcagcaagaccaggagcaagaagagaaacattagaagcatatattaagagattggaaaaa
ttggaagaaatcgcaaattcctatgaaggtgtagaaaagtcatatgccattcaagctgga
agagagataagaattattgttaaaccagacaaagttgacgatgctggtactgctgaatta
gcgagaaatttagtgaagagcgtagaagaacaacttgaatatccaggacaaattaaaatt
aatgtaataagagaaactagaacagtagagtttgctaaataa
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