Clostridium taeniosporum: BGI42_08990
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Entry
BGI42_08990 CDS
T04957
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGI42_08990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctae03019
]
BGI42_08990 (recQ)
03400 DNA repair and recombination proteins [BR:
ctae03400
]
BGI42_08990 (recQ)
Enzymes [BR:
ctae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BGI42_08990 (recQ)
Messenger RNA biogenesis [BR:
ctae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGI42_08990 (recQ)
DNA repair and recombination proteins [BR:
ctae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BGI42_08990 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AOR23855
UniProt:
A0A1D7XKH4
LinkDB
All DBs
Position
complement(1970740..1973178)
Genome browser
AA seq
812 aa
AA seq
DB search
MKSKELSLLEKYYGYKSFRKGQENIISTILEGNDTLAIMPTGGGKSICYQIPALIFKGLT
IVISPLISLMKDQVDSLKDMGIQGEFINSSISGIEENNVIENIKNGKCKILYIAPERLES
LNFLNVISECDISQIAIDEAHCISQWGHDFRTSYTKIVGFIKLLKNRPIITAFTATASEE
VREDIIKLLNLNNAKVFITGFDRENLFINVIKSGDKKNYLYNYINNNKESSGIIYAATRK
EVDKIYEELNYNGFSATKYHAGLSEKDRNKNQEDFIYDKSGIMVATNAFGMGIDKPNIRF
VVHYNMPKNIEGYYQEIGRAGRDGDKSECILLFSPQDVQIQKYLIEQSIENFERKNNQYR
KLNEMTDFVYTNECYRKYILDYFGENYGHECENCSNCLNEGELVDKTIDAQKVLSCIYRM
KNKFGTGMLMDVLRGSKNKKVLQFKFNELSTYGIMKDYSNEELKNFINTLISHRYISVVN
GTYPVLGLNQNSMKVLKSQEKVIFKEFKVEKKAKEDNKLYSILKEIRREFSIENGVPPYV
IFGDATLKEMSAKYPMNKEDMLNISGVGEIKYKKYGERFESEIKKFVKDNNIELSDKTKK
QEEIKMENIHLEVNSDEKLFDRLDSLRNEIAKKENTIPKMIMSKKSLKEISGRYPRTIDQ
LKDISGVGPKKIELCGEKLIFTVNDYILENHIEVTWINRKKRNVIIDGEHREDNEIAIDM
LKEGKKLSEIFEEIEISISTILGYVTDYIKEFGEINFNLNLEDLYNKEEEVQIIDVCEKI
GYEKISAIKKQLPSFIKYESIRAVILKKYYLN
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaagaattatcacttttagaaaagtattatggatataagtcttttagaaaa
gggcaagaaaatataatttcaactattttagaaggaaatgatacattagctataatgcca
acaggtggtggaaaatcaatttgttatcaaattccggcacttatatttaaaggattaaca
attgttatttcaccacttatttctttaatgaaagatcaggtagatagtttaaaagatatg
gggatacaaggagaatttattaatagttcaataagtggtattgaagaaaataatgttata
gaaaatataaaaaatggaaagtgtaaaatattatacatagctccagaaagattagaatca
cttaatttcttaaatgttatttcagaatgtgatatatctcaaattgcaatagatgaagca
cattgtatttctcaatggggacatgattttagaacaagctataccaagatagtgggattt
attaaattacttaaaaatagacctataattactgcatttacagctacagcttcagaagaa
gtaagagaagatatcataaaacttctcaatttaaataatgctaaagtttttattacagga
ttcgatagggaaaatttatttataaatgtaataaaatcaggagataaaaaaaattattta
tataattatataaacaacaataaagaatcttcaggtataatttatgcagcaactagaaaa
gaagttgataaaatatatgaagaattaaattataatggattttcagctactaaatatcat
gcagggttatcagaaaaagataggaataaaaatcaagaagattttatatatgataaaagt
ggcattatggtagcaactaatgcatttggaatgggaatagataaaccgaatataagattt
gtagttcattataatatgcctaaaaatatagagggatattatcaggaaataggtagagca
ggaagagatggggataagagcgaatgtatattattattttcacctcaagatgttcaaata
caaaagtatttaatagaacaatctattgaaaattttgaaagaaagaataatcaatataga
aaacttaatgagatgactgattttgtatatacaaatgaatgttatagaaaatatatatta
gattattttggagaaaattatggtcatgaatgtgaaaattgtagcaattgtttaaatgaa
ggagaattagttgataaaactatcgatgctcaaaaagtactttcatgtatatatagaatg
aaaaataaatttggtacaggaatgcttatggatgtattaagaggatctaaaaataaaaaa
gtattacaatttaagtttaatgaactatcaacatatgggattatgaaagattattcaaat
gaagaacttaaaaattttataaatacattaatatctcataggtacatatcagttgttaat
ggaacatatccggttttaggtttgaatcagaattccatgaaagttttaaaatcacaagaa
aaggttatatttaaagaatttaaagttgaaaagaaggctaaagaagataataaattatat
tctattcttaaggaaataagaagagaattctctatagaaaatggtgtacctccatatgtt
atatttggagatgccacattaaaagaaatgtcagctaaatatccaatgaataaagaagat
atgctcaatatatctggagtaggagaaataaaatataaaaaatatggagaaagatttgaa
agtgaaataaaaaaatttgtaaaagataataatattgaattatctgataaaacaaaaaaa
caagaagaaattaaaatggaaaatattcatttagaggttaatagtgatgaaaagttattt
gatagattagatagcttaagaaatgaaatagcaaagaaagaaaatacaattccaaagatg
ataatgtcaaaaaaatctctaaaagaaataagtggtagatatcctagaactattgatcaa
ttaaaagatataagtggggttggaccaaagaaaattgaattatgtggagaaaagctgatt
tttacagtcaatgattatattttagaaaatcatattgaggtaacatggattaatagaaaa
aaaagaaatgtaattattgatggagagcacagagaagataatgaaattgcaattgatatg
ttgaaagaagggaaaaaactatctgaaatatttgaagaaatagaaatttcaatttcaact
attttaggatatgttacagactatataaaagaatttggagaaattaactttaatttaaat
ttagaagatttatataataaagaggaagaagttcaaattattgatgtatgtgaaaaaata
ggatatgagaagataagtgcaataaagaaacaacttccttcatttataaaatatgaatca
atacgtgcagtaatattaaaaaaatattatttaaactaa
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