Clostridium taeniosporum: BGI42_13305
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Entry
BGI42_13305 CDS
T04957
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03030
DNA replication
ctae03430
Mismatch repair
ctae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BGI42_13305
03430 Mismatch repair
BGI42_13305
03440 Homologous recombination
BGI42_13305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctae03032
]
BGI42_13305
03400 DNA repair and recombination proteins [BR:
ctae03400
]
BGI42_13305
Enzymes [BR:
ctae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BGI42_13305
DNA replication proteins [BR:
ctae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BGI42_13305
DNA repair and recombination proteins [BR:
ctae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BGI42_13305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AOR24658
UniProt:
A0A1D7XMU4
LinkDB
All DBs
Position
complement(2975025..2978636)
Genome browser
AA seq
1203 aa
AA seq
DB search
MLTNDNKNIDTIHNNKKQFCHLHLHTGYSLLDGSGKIKEIMAKTKELGMDSIAITDHGVL
YGLVDFYKAAVEYGIKPILGCEVYVAGKSMKIKQPDKDNSTYHLVLLVKNEVGYRNLMKI
VSIASIEGFYYKPRVDHDYLRSHSEGLIALSACLGGEVQSYELKENYEKAKETALLYKDI
FKENFYLEIQNHGMDEQRRVNEDNIRLSKELGIPLVATNDVHYIKKDGYKSHDILMCIQT
GKTVDDVNRRRYPSDQFYLKSPEEMWEMFSYIPEALENTTNIAEQCNYEYKFHESKLPKF
PLPEGEEPYSYLKKTCYTGLIDRYDEFKDFRGKDLNYSKLEELKFENDSAKELLDRLEYE
LQIIKQMGYVDYFLIVWDFIKFANDNDIPTGPGRGSAAGSIVAYTLGITKIDPIKYSLIF
ERFLNPERVSMPDIDSDFCYERRQEVIDYVVEKYGEDNVSQIITFGTMAARACIRDVGRA
MNYSYSEVDKICKMIPTMLGITIEKALNLNPELKEIYDKDERIRSLIDMSKDLEGLPRHS
STHAAGVVIASNPLVEYVPLQKNDEMIVTQFGMTTLEELGLLKMDFLGLRTLTVMSEALK
LIKDNKNIEINLDKIDFDDKEVYKMIGEGKTAGVFQLESPGMVSFMKELKPDSLEDIIAG
ISLYRPGPMAEIPRYIECKRNPDKVKYDTPELEDILDVTYGVIVYQEQVMEIVRKLAGYS
MGRSDMVRRAMSKKKHKVMEEERKNFMHGIIENDEVVVPGCIRNGISEEVANKIFDNMMD
FASYAFNKSHAAAYAVVGYQTAYLMRYYPVEMIAAMLNSFMGSSDKVVYYISKAEELGIQ
VLPPDINESFAKFTVKGDTIRFGLAAIKNVGMNLINSVVKTREVKDKFDSLYDFINKIDL
SAINKRTIESLIKAGTFDSFKIYRSQLLAVYEKMVDSISSDRKRNIDGQISLFAADDIYV
PQINYPNIKEFDKKTLLAMEKEMTGLYISGHPLDDYVQSLKFQTSNEIGKIFSHNEMLDN
TLEIPMADDVVINNESGIKDNDRVILGGILTQVNKKVTRNNTIMAFIQLEDLTGTIEVIV
FPKVLDRVRELCYEDALVIIKGRISLKADELPKLICESIEPLEKINSTKVYLRVENTIKA
KELSLNLKELLKEYNGDTPIYIFSQEQRQQFRVPRDRWVNINEDALNLLRKFVGDENVKV
VEL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaatgacaataaaaatatagatacaattcataataataaaaaacaattttgt
catcttcaccttcatactggatatagcttgttagatggatcaggaaaaataaaagagatt
atggctaaaactaaagaacttggaatggacagtattgctataactgatcatggagtttta
tatggacttgtagatttttataaagcagctgtagaatatggaattaaaccaatattaggt
tgtgaagtatatgttgcaggaaaatctatgaaaataaaacaaccggataaagataattca
acatatcatttggttttattggtaaaaaatgaagttggatatagaaatttaatgaagata
gtctctatagcatctatagaaggattttattataaacctagagtagatcatgattattta
agatctcatagtgaaggactaatagcgcttagtgcgtgtttaggtggagaagttcaatct
tatgaattaaaggagaattatgaaaaagctaaagagacagccttattatataaagatata
tttaaggagaatttttatttagaaattcaaaatcatggaatggatgaacagagaagagta
aatgaagataatataagattatctaaggaattaggaataccattggttgctactaatgat
gttcattacataaaaaaagatggatataaatcccatgatatattgatgtgtattcaaact
ggtaaaactgtagatgatgttaatagaaggagatatccttctgatcagttttatttaaag
tctccagaagaaatgtgggaaatgttctcttatattccagaagcattagaaaatactaca
aatattgctgagcagtgtaattatgaatataaatttcatgaatcaaaattacctaaattc
ccattaccagaaggggaagagccttatagctatcttaaaaaaacttgttatactgggtta
atagataggtatgatgagtttaaagattttagaggaaaagatttaaattatagtaagtta
gaagagttgaaatttgaaaatgattctgctaaagaacttttagatagacttgaatatgaa
cttcaaataataaaacaaatggggtatgtagattactttttaattgtttgggattttatt
aagtttgcaaatgacaatgatataccaacaggtcctggacgtgggagtgcagcgggttca
atagtagcatatactttaggaataacaaagatagatccaataaagtatagtttgatattt
gagagatttttaaatcctgagagagtatctatgcctgatatagatagtgatttttgctat
gaaagaagacaagaagtaatagactatgttgtagaaaagtatggagaagataatgtatca
caaattataacttttggaacaatggctgctagagcgtgtattagagacgtaggaagagct
atgaactatagttatagtgaagtagataaaatatgtaagatgatacctacaatgcttgga
atcacaatagaaaaggcattaaatcttaatcctgaactaaaagagatatatgataaggat
gaaagaataagatcgttaatagatatgtcaaaggatttagaaggtcttccacgacattca
tcaactcatgcagcaggagtagttatagcatctaatccattagttgagtatgttcctcta
caaaaaaatgatgaaatgatagtaactcaatttggaatgacaacactagaagagttagga
ttattgaaaatggactttttaggcttaagaactttaactgtaatgagtgaagctcttaaa
cttataaaggataataaaaatatcgaaataaatttagataaaatagattttgatgataaa
gaagtttataaaatgataggggaaggtaagactgcaggagtattccaattagaatcacca
ggaatggtatcttttatgaaagaattaaaacctgattcattagaagatataattgcagga
atttcattatatagaccaggtcctatggctgaaataccaagatatatagagtgtaaaagg
aatccagataaagttaaatatgatacaccagaattagaagatatattggatgtaacttat
ggggtaatagtatatcaagaacaagttatggagatagttagaaagcttgcaggatattct
atgggacgaagtgatatggttagaagagccatgtctaagaaaaagcacaaagttatggaa
gaagaaagaaaaaactttatgcatggaattatagaaaatgatgaagtagtagttccaggt
tgtattagaaatggaattagtgaagaagtagcaaataaaatttttgataatatgatggac
tttgcatcttatgcttttaataaatctcatgcagctgcttatgctgtagttggatatcaa
acagcttatttaatgagatattatccagttgaaatgatagctgctatgttgaactcattt
atgggaagcagtgataaggtggtatattatatttctaaggcagaagaattgggaatacag
gtacttccaccagatataaatgaaagttttgctaaatttactgttaaaggtgatactatt
agatttggtttagcagcaataaagaatgttggtatgaacttgataaatagtgttgtaaaa
acaagagaagttaaagataagtttgattcattatatgattttattaataagatagattta
tcagctataaataagagaaccattgaaagtttaataaaagctggaacatttgatagtttt
aaaatatataggtcacagttattagctgtatatgaaaaaatggttgatagcatttcaagt
gatagaaagagaaatatagatggtcaaataagtctatttgcagctgacgatatatatgta
ccacaaattaattatcctaatataaaagaatttgataaaaaaacattacttgcaatggaa
aaggaaatgacaggattatatatatctgggcatccattagatgactatgtacagagttta
aaatttcaaacttcaaatgaaataggaaaaatattttctcataatgaaatgttagataat
actttagaaatacctatggcagatgatgttgttattaataatgaatctggaattaaagat
aatgatagggtaattttaggtggaatattaactcaagtaaataaaaaagttacaagaaat
aatactattatggcatttatacaattggaagatttaacaggaactatagaagttatagta
tttccaaaagtgttagatagagtgagagaattgtgttatgaggatgccttagtaataatt
aaaggaagaataagtttaaaagcagatgaattacctaaattaatatgtgagagcatagaa
ccattagaaaaaataaattctaccaaggtttatttaagggtagaaaatactattaaagca
aaagaattaagtttaaatttaaaagaattattaaaggaatataatggtgatacacctatt
tatattttttcacaagaacaaaggcaacaatttagagtgccaagagacagatgggtaaat
attaatgaggatgcattaaatttattaagaaaatttgttggggatgaaaatgtaaaagtg
gtagaattatag
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