Clostridium taeniosporum: BGI42_13360
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Entry
BGI42_13360 CDS
T04957
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BGI42_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctae03400
]
BGI42_13360
DNA repair and recombination proteins [BR:
ctae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BGI42_13360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BGI42_13360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Microtub_bd
AAA_22
Kinesin
T2SSE
SWI2_SNF2
DUF87
nSTAND3
NPHP3_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AOR24668
UniProt:
A0A1D7XMV3
LinkDB
All DBs
Position
complement(2991973..2993946)
Genome browser
AA seq
657 aa
AA seq
DB search
MGEFKIHSKFKPTGDQPQAIDSIVKSIKDNNRCQTLLGVTGSGKTFTMANIIEKLQRPTL
ILAHNKTLAAQLCSEFKDFFPDNIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTISLRKGMEKERDEIIKKLIEIQY
ERNDIDFSRGTFRVRGDLLDIIPSSTSSKGIRIEFFGDEIDRIREFDVLTGKIIGERNHV
SIFPASHFATSKETLERSLSEIESELEDRLRELNSQEKLLEAQRLRQRTNFDIEMIREMG
YCSGIENYSRILDGRASGTPPKTLIDYFPEDFLLFIDESHVTLPQVKAMYAGDRSRKNTL
VDYGFRLPCAYDNRPLKFQEFEKKINQVVFVSATPAQYELDNSDVISEQVIRPTGLLDPE
IIVKPVKGQIDDLYAEIKETISKGYRILITTLTKRMAEDLTKYMIDLGIKATYMHSDIDT
IERMKIIRDLRLGEYDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSKSKVIMYADNITKSMKKAISETERRRKIQTEYNKKHGIIPQTINKEVREVIEATKV
SEEATEYDVKETKPLTKKEKDKLIKEYTDEMMLAAKNLQFERAAQLRDKIEELNGKE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttaaaatacattcaaaatttaaacctacaggagatcaaccacaggctatt
gacagtatagtaaagtcaattaaagataataatagatgtcaaacattacttggtgtaaca
gggtcaggtaaaacatttactatggctaatataatagaaaaattgcaaaggccaactctt
attttagctcataataagactcttgcagcacaattatgttctgaatttaaagacttcttt
ccagataatatagttgagtactttgtatcttattatgattattatcaaccagaagcatat
gtaccacaaactgatacttttattgaaaaagatgcatctataaatgatgaaatagataaa
cttaggcattcagctacttctgcattatttgagagaagagatgtaattatagttgcatca
gtttcatgtatatatggtcttggtaatccagatgaatataagaagttaactataagttta
agaaaaggaatggaaaaagagagagatgaaataataaaaaagcttatagaaattcaatat
gaaagaaatgatatagatttttcaagaggtacatttagagtaagaggagatttgttagat
ataattccatcatcaacatcaagcaaaggaataagaatagaattttttggtgatgaaatt
gataggattagagaattcgatgtattaacaggaaaaataataggagagagaaatcatgtt
tcaattttcccagcatctcactttgcaacttcaaaggaaactttagaaagatcgttatca
gagatagagagtgagttagaagatagattaagagaacttaattctcaagaaaagttatta
gaagcacaaagattaagacaaaggactaattttgatatagagatgataagagaaatgggt
tattgtagtggaatagaaaattattcaaggatacttgatggaagggcgtctggaactcca
cctaaaacattaatagattattttccagaagattttctattatttattgatgaaagtcat
gttacattgccacaagtaaaagctatgtatgcaggggatagatcaaggaagaatacattg
gtggattatggatttagattaccatgtgcttatgataatagaccattaaaatttcaagaa
tttgagaaaaaaataaatcaagtagtatttgttagtgcaactccagctcaatatgagtta
gataattcagatgttatatcagaacaggttataagaccaacaggattattagatccagaa
attattgttaaaccagtaaaaggtcaaattgatgatttatatgcagaaattaaggaaaca
atatcaaaaggatatagaatattaattacgactttaaccaaaagaatggccgaggattta
actaaatatatgatagaccttggaataaaagcaacatatatgcattctgatattgatacc
attgaaagaatgaagattattagagatttaagattaggtgaatatgatgttttagttgga
ataaatcttttaagagaaggattggatataccagaggtggctttagttgctatattagat
gcagataaagaaggattcttaagatcagaaacatcattaattcagacaataggaagagct
gcaagaaattcaaaaagtaaagtaataatgtatgcagataatattactaaatcaatgaaa
aaagcaattagtgaaactgaaagaagaagaaaaatacaaactgaatataataaaaaacat
ggaataattccacaaacaattaataaagaggttagagaagtaatagaggctacaaaggtt
tcagaagaagctacagaatatgatgttaaggaaacaaaacctttaacaaagaaggaaaaa
gataagcttataaaagaatatacagatgaaatgatgcttgcagctaaaaatcttcaattt
gaaagagcggcacaattaagagataagatagaagaattaaatggaaaagagtga
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