Clostridium taeniosporum: BGI42_15640
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Entry
BGI42_15640 CDS
T04957
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BGI42_15640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctae03019
]
BGI42_15640
Enzymes [BR:
ctae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BGI42_15640
Messenger RNA biogenesis [BR:
ctae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BGI42_15640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
rpo132
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AOR25169
UniProt:
A0A1D7XPS3
LinkDB
All DBs
Position
pCt3:complement(130867..132162)
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AA seq
431 aa
AA seq
DB search
MLFKDLKIIEPIQKALTEAGYTNPTPIQEQSIPSLLKGKDFLGCAQTGTGKTAAFAIPVL
QNIAKNKKKSDESRTIQALILAPTRELAIQIEENFNLYSKHTNIKNTVIFGGVSQKPQTK
ILREGVDILIATPGRLLDLINQKYIDLSNVKHFVLDEADRMFDMGMVRDVKKIVAKLPKV
RQNLLFSATMPSEVKNLVNSILKDPIRVEVAPVSSTIDTITQGVYFVKKKDKKSLLVHLL
KDESIKSLLVFSRTKYGANNIVKDLVKTGTESQAIHGNKSQNARQLALSNFKEGKIRVLV
ATDIAARGIDVDGLSHVINYDLPDVPETYVHRIGRTGRAGHSGVALSFCDIEERNALKDI
EKVIGKNIPVMDNVEFEKIVITREPAQKKEADKKGTGSRKPRRNWYANKKRKNGNGSQQG
KKQSGRIQQAK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaaagatttaaaaataatagaaccaattcagaaagctttaacagaagctgga
tacacaaatcctacaccaatacaagaacaatcaattccatcattattaaagggaaaagat
tttctaggatgtgctcaaacaggtacaggtaagacagcagcttttgctattcctgtttta
caaaacattgcaaaaaataaaaagaaatcagatgaatcaagaacaatacaagctttaata
ttagcaccaactagagaattagcaattcaaatagaagagaattttaatctttatagtaaa
cacactaatattaaaaatacagtaatatttggtggggtatcacaaaaacctcaaactaaa
atattaagagaaggagtggatattttaatcgcaactcctggtagattacttgatttaata
aatcaaaaatatattgatttaagtaatgttaaacattttgtattagatgaagctgaccgt
atgtttgatatgggaatggttcgtgatgtaaaaaaaatagtagctaagttaccaaaggtt
agacagaatcttttattctcagcaactatgccttcagaagttaagaatttagtaaatagt
attcttaaagaccccataagagttgaagtagcgcctgtttcatcaactatagatactatt
actcaaggagtatattttgttaaaaagaaagataagaagtctttacttgttcatcttctt
aaagatgaatctattaagtcattattagtattttcaagaaccaaatatggagcaaataat
attgtaaaagatcttgttaagactggaactgagtctcaagcaattcatggtaataaatct
caaaatgcaagacaacttgctttaagtaattttaaagaaggtaaaataagagttttagta
gcaactgacatagctgcaagaggaattgatgtagatggcttatctcatgttataaattac
gatttacctgacgtaccagaaacttatgtacatagaattggaagaactggtagagctgga
catagtggagtagcattatcattctgtgatattgaagaaagaaatgcacttaaggatatt
gaaaaggtaataggaaagaacattcctgtaatggataatgttgaatttgaaaaaatagtt
ataaccagggagcctgctcaaaagaaagaagcagataagaagggtactggttctagaaaa
ccaagaagaaattggtatgctaataaaaaaagaaagaacggtaatggtagccagcaagga
aaaaaacaaagtggtagaattcaacaagctaaatag
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