Clostridium tagluense: LL095_13895
Help
Entry
LL095_13895 CDS
T08715
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ctag
Clostridium tagluense
Pathway
ctag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL095_13895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctag03019
]
LL095_13895
Enzymes [BR:
ctag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LL095_13895
Messenger RNA biogenesis [BR:
ctag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL095_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WAG48992
LinkDB
All DBs
Position
complement(2963279..2964553)
Genome browser
AA seq
424 aa
AA seq
DB search
MLFENLNLITPIKKALETEGYVEATPIQEAAIPSILSGKDFLGCAQTGTGKTAAFAIPIL
QILCGKQKVIKGPKNIKALILAPTRELAIQIGESFDAYGKHMNLTSAVIFGGVSQKKQTD
ALKGGVDILIATTGRLLDLMQQKFISIHHVEMFVLDEADRMLDMGFLRDVKKVIAQLPKI
RQTMLFSATMPPEISKLVDSILVNPVKVAVTPVSSTIEIIEQSVYFVDKKDKKPLLIHLL
QDKSIVSALVFSRTKHGANKITKDLNNSGIEAQAIHGNKSQSARQLALNNFKAGITRVLV
ATDIAARGIDVDELSHVINFDLPNIPETYVHRIGRTGRAGLGGVAISFCDAEEKDFLKDI
QKVIAKSIPVIEDHPYPASNLPIVVTKDNTKKVSTGKSGANGYARRNERNQSGRQQPRNA
RAAR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttattcgaaaacttaaatctcattacgccaattaaaaaagcactagaaactgaaggt
tacgtagaagctacacctatacaagaagctgcaattcctagtatattgagtggaaaagac
tttttaggctgtgctcaaacaggcactggaaagacagcagcctttgctattcctatactt
caaattctttgtggaaagcaaaaagttataaagggacctaaaaatataaaggccctaatc
ctggcaccaactagagaactggcaattcaaattggagaaagctttgatgcctatggcaaa
catatgaatcttactagtgcagttatttttggaggtgtatcacaaaaaaaacaaactgat
gcattaaaaggcggagtagatattttaattgcaactactggtagactacttgacttaatg
caacagaaatttattagcatacatcatgtggaaatgtttgtacttgatgaggcggatcgt
atgcttgatatgggattcttgcgcgatgtaaaaaaagttatagcgcaactacctaaaatc
agacaaaccatgctattttcagcaactatgccaccagaaatttcaaagctagtggattct
attcttgtgaatccagtaaaggtagcagtaacacctgtttcttctactattgaaattatt
gaacaatcagtatattttgtggataaaaaagataaaaaacctctactaattcatttgttg
caagataagtccatagtttctgctttggtattctcaagaacaaagcacggagcaaataaa
ataactaaagatctcaataattctggaatagaggctcaagctattcacgggaataaatca
caaagtgctaggcaacttgccttaaataattttaaggctggtattacaagggtattagta
gcaacagatatagcagcaagaggtatagatgttgatgaattatctcatgtgatcaatttt
gatttacccaatataccagaaacctatgtacatagaataggaagaactggcagggcagga
cttggtggagtagcaatttcattttgtgacgcagaagaaaaagatttcctaaaggatatt
cagaaggttattgcaaaatcaataccagtaatagaggatcatccttatcctgcaagtaat
ttaccaatagtagttactaaggataacacaaagaaagtttctacaggaaagtcaggagca
aatggttatgcaagacggaatgaaagaaatcaatccggaagacagcaacctagaaatgct
agagcagcaagataa
DBGET
integrated database retrieval system
