Clostridium tagluense: LL095_15350
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Entry
LL095_15350 CDS
T08715
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ctag
Clostridium tagluense
Pathway
ctag03410
Base excision repair
ctag03430
Mismatch repair
ctag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LL095_15350 (recJ)
03430 Mismatch repair
LL095_15350 (recJ)
03440 Homologous recombination
LL095_15350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctag03400
]
LL095_15350 (recJ)
DNA repair and recombination proteins [BR:
ctag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LL095_15350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LL095_15350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LL095_15350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WAG49271
LinkDB
All DBs
Position
complement(3253957..3255726)
Genome browser
AA seq
589 aa
AA seq
DB search
MEKKWLIRSTSKDIKALAKKSGVSEVLAKILINRGFNNEIDIKKFMRASLEDLYDPFLMK
DMEKAIELIKLAIENKKKIVVYGDYDADGVTSTVIMYKSLKQCGAAVEYYVPDRELEGYG
INSDRIRKLSLEGFEVILTCDNGIAAMQQVKLAKELGMTVIITDHHELSFEEDSTGHRTF
SIPQADAVINPKQKECNYPFKQLCGAGIALKFVQALYLKLGINSEAVKEFIEIAGIGTIC
DVVDLIDENRIIAKNALGMLTNTKNIGLKCLKEILSIEGKAIKSYHVGFQIGPCINATGR
LESAAISVELLICEEQTRAVELAKTLYELNKKRQDMTTENVQQVIELVQHSPFKNDKVLV
IYKDTIHESIAGIVAGRVRETFNVPTIILTSGKESPKGSARSIEEYNLFEELIKCEELLL
KFGGHPMAAGLSIKEENIEKLRLKLNSICKLTDEDIIPKVRIDERMPLNKINYGIIEELE
LLEPYGKGNSSPLLAEKNIPVLKIDILGKSANTIKIKFLIPGTNKTIDGIFFNRVEEFME
MLKDSYGEEYKTYLDTPRGMKLDLIFSPQINEYNGYKSIQLKVIEFKLS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaagtggttaataagaagtacctctaaagatattaaagcactagcaaaaaaa
tctggtgtaagtgaggttttagctaaaattttaattaataggggatttaataatgaaata
gatataaaaaaatttatgagggctagtttagaggatttatatgatccatttctaatgaaa
gatatggaaaaagccatagaactaataaaactcgctattgaaaacaagaaaaaaatagta
gtatatggagattatgacgcggatggtgttactagtactgttataatgtacaaatcatta
aaacaatgtggtgcagctgtagaatactatgttcctgatagagaacttgaaggttatggc
ataaatagtgataggattagaaaactcagcctagaagggtttgaggtgattttaacatgt
gataatggaattgctgcaatgcagcaggtaaaactagcaaaagaactaggaatgacagtt
ataataactgatcatcatgagttatcttttgaggaagatagcacaggccatagaaccttt
agtatcccccaagcggatgcagttattaacccaaaacaaaaggaatgtaattatccattt
aaacaactctgtggagcaggtattgcacttaaatttgtacaagcgctatatttaaaactt
ggaattaatagtgaagctgtaaaagaatttatagaaatagcaggaataggaaccatttgt
gatgtggtagatttgatagacgaaaatagaataattgctaaaaatgcattaggaatgtta
acaaatacaaaaaatattggtttaaaatgtttaaaagaaattttgagcattgagggtaaa
gcgataaaatcttatcatgttgggtttcaaataggaccctgcataaatgctacagggaga
ctagagtcagcggccatttcagttgaacttcttatatgtgaagaacaaactagagcagtg
gaactagctaaaacactatatgaacttaataaaaaaagacaagatatgacaacggaaaat
gtgcagcaggtcatagaacttgtacagcattcccctttcaaaaatgacaaagtattagta
atttataaagataccattcatgagagtatcgcaggaattgtagcagggcgtgttagggaa
actttcaatgtgccaacaataatattaactagtgggaaggaaagtcctaaaggttcagca
agatctattgaagaatataatttatttgaggaattaataaaatgcgaagaactactttta
aaattcggaggacacccaatggcggcaggtctttctataaaagaggaaaatatagaaaaa
ttaaggctaaagttaaattctatatgcaagctaacagatgaagatattatacctaaagta
agaatagatgagaggatgccgcttaataaaataaattatgggataattgaagaattagag
cttttagaaccgtatggaaaaggtaattcttcaccactactagctgaaaaaaacataccg
gttttaaaaatagatatattaggtaaaagtgcaaatacaataaaaataaaatttttaatt
ccaggaacgaataaaaccattgatggaatatttttcaatagggtagaggaatttatggaa
atgttaaaggactcctatggagaagaatataaaacctatcttgatactccaagaggaatg
aaactagacttaattttttcacctcaaattaatgagtataatgggtacaagtctattcaa
ttaaaagtcatagaatttaaacttagttaa
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