Clostridium tagluense: LL095_16980
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Entry
LL095_16980 CDS
T08715
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ctag
Clostridium tagluense
Pathway
ctag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL095_16980 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctag03019
]
LL095_16980 (recQ)
03400 DNA repair and recombination proteins [BR:
ctag03400
]
LL095_16980 (recQ)
Enzymes [BR:
ctag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LL095_16980 (recQ)
Messenger RNA biogenesis [BR:
ctag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL095_16980 (recQ)
DNA repair and recombination proteins [BR:
ctag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LL095_16980 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF6572
Helicase_Sgs1
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
WAG49574
LinkDB
All DBs
Position
complement(3662502..3664676)
Genome browser
AA seq
724 aa
AA seq
DB search
MLRKAQEKLKKYYGYDSFRKGQESVIESIINGKDTFAVMPTGAGKSVCYQIPALLLPGVT
LVISPLISLMKDQVDTLNSVGIAATYINSSLSINEVNERIDKTSKGEFKLLYVAPERLES
EFFCNMLNRLTISLLAVDEAHCVSQWGHDFRPSYSAISSLIRKLHVRPIIAAFTATATQA
VRLDVIKLLELREPDIYVTGFNRENLSFTVIRGENKRDFVLKYIEDNKDKVGIIYTATRK
ETDNLYELLNKKGYNVGKYHAGLADSQRKENQEKFLYDDINIIIATNAFGMGIDKSNVRY
VIHYNLTKSMEAYYQEAGRGGRDGEPSECILLFSAADVLLQKFFIEQSTVSPERKISEYK
KLQAMVDYAHTTRCLRQFILEYFGEENTRDKCDNCSTCNDESELVDITIEAQKIFSCILR
MKERFGTTLIAEVLRGSKNKKVLDLGFEKLSTYGIIKQYTVKEIRDLINVLTAEDYLSLA
DGQFPVVRLKEKAVAVLKNQEKVYQKVEKKKAKAAGGNGLFEILRSLRKEISEREKVPPY
IVFADSALREMSEYFPVNKSEMLSIKGVGESKLNKYGEEFIQAIKKYMNENNIEFKEEIL
YNEEVDIKALNEAAVEQKGENEDKLPSYVITYNMYKEGMRIEDIISERQLKSLTVQDHIL
KCAYEGFEVNLDDFIPKNHEALIIEVIEKIGASKLKPIKDALPKEVDYLAIKATIFKHAN
NKIS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtaaagcacaagaaaaattaaagaagtattatggatatgatagttttagaaaa
ggacaagagagtgtaattgagagtattataaatgggaaggatacatttgctgtaatgcct
acaggtgcaggaaaatcagtttgttatcagattccggcactgcttctaccaggagtaact
cttgtaatatcaccacttatatcccttatgaaggatcaggtagataccttaaatagtgta
ggtatagcggcaacatatataaatagctcactcagcattaatgaagttaatgaaagaatt
gataagacttctaagggagagtttaagcttctttacgttgcacctgaaagactagaatca
gaatttttctgtaacatgctaaatagattaacaatatcgcttttagcagtggatgaagct
cattgtgtatctcaatggggacatgattttagacctagttattcagcaatttctagtttg
ataagaaaattacatgtaagaccaattatagcagcttttactgcaactgcaacgcaggct
gtaagattagacgttataaagttactagaattaagggagccagatatttatgtaactggg
tttaatagagaaaatttaagctttactgttattcgtggagaaaacaaaagagattttgtt
ttgaaatatattgaagataataaagacaaagtaggtataatctataccgctacaagaaag
gaaacggataatctttatgagcttttgaataaaaagggatacaatgttggaaaatatcat
gcaggactagctgactcgcagaggaaagaaaaccaagaaaaatttttgtatgatgatata
aatattattattgctacaaatgcctttggaatgggaatagacaaatcaaatgttcgatat
gtaattcattataatttaacaaagagcatggaggcttattatcaagaggcagggcgtgga
ggccgtgatggagagcctagtgaatgcatattattattttctgcagcagacgtactactt
caaaaattctttatagaacaaagcaccgtgtctcctgaaagaaagataagcgaatacaag
aaacttcaagctatggtggattacgcgcatacaactagatgccttaggcagtttatttta
gaatattttggtgaagaaaatactagagataaatgcgacaattgtagcacttgcaatgat
gaaagtgagttagtagatataactattgaggcacaaaaaatattttcttgcatccttagg
atgaaggagagatttggtactacattaattgcagaggtgcttcgaggttctaagaataaa
aaagttttggaccttggatttgaaaaactatctacctacggaataataaagcaatatact
gttaaagagataagagaccttataaatgtgcttacggcagaagactatttatcccttgca
gatggtcaatttccagtggttcgtttaaaagaaaaagctgtggcagtactcaaaaaccag
gaaaaggtctatcagaaggttgagaagaaaaaagctaaggcagctggcggtaatggttta
tttgaaatattgcgctcacttcgaaaagagatttctgagcgggaaaaagttccaccatat
attgtttttgcagatagtgccctaagagaaatgagcgaatatttcccagtaaataagagt
gaaatgttaagtatcaaaggggtaggagaatctaaacttaataagtatggagaagaattt
attcaggctataaaaaaatatatgaatgaaaataatatagaatttaaggaagaaatacta
tataatgaagaagttgatattaaggctttaaatgaagcggcagtagaacagaagggcgaa
aatgaagataagctgcctagctatgttattacttataatatgtataaagagggcatgcgc
atagaagatataatttctgagagacaattaaaaagtcttacagtacaagatcatatatta
aaatgtgcttatgagggatttgaagtgaatttagatgattttattccgaaaaatcatgaa
gcacttattatagaggtcatagaaaaaattggagcttcaaagttaaaacctattaaagac
gcgctaccaaaggaagtagattatttagctataaaagcaactatatttaagcacgcgaac
aataaaatttcttag
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