Clostridium tagluense: LL095_19550
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Entry
LL095_19550 CDS
T08715
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctag
Clostridium tagluense
Pathway
ctag03030
DNA replication
ctag03430
Mismatch repair
ctag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LL095_19550
03430 Mismatch repair
LL095_19550
03440 Homologous recombination
LL095_19550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctag03032
]
LL095_19550
03400 DNA repair and recombination proteins [BR:
ctag03400
]
LL095_19550
Enzymes [BR:
ctag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LL095_19550
DNA replication proteins [BR:
ctag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LL095_19550
DNA repair and recombination proteins [BR:
ctag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LL095_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WAG50038
LinkDB
All DBs
Position
complement(4253305..4256877)
Genome browser
AA seq
1190 aa
AA seq
DB search
MHQKSEKEDVENFVHLHVHTEYSLLDGSGKIKELLSKTKELGMKSIAITDHGVMYGCVEF
YKQAKEQGIKPIIGCEIYVAAKSMYIKEADRENQTHHLVLLVKNALGYENLMKIVSAASI
KGFYYKPRVDHEFLSKYSEGIIASSACLGGEVQSHLLRDNYEKAKEIALQYKEIFKDGFY
LELQYHGMQDQLKVNELLIKLSKDTGIPLICSNDTHYINKEDAKAHDVLLCIQTAKTVDE
ENRMRYPSDEFYLKSPDEMKKTFAYVPEALSNTVKIAEQCNFDYEFHVSKLPKFPLPEKV
DPYEFLRENCYKGMSSLYKVFSEVQEKGFSIEYVNEIALGSDQAKEYVVRLEYELNIIKQ
MGYIDYFLIVWDFIKFAVEHDIPTGPGRGSAAGSIVAYALGITKIDPIKYSLIFERFLNP
ERVSMPDIDSDFCYEGRQAVIDYVVEKYGSDNVSQIITFGTMAPRACIRDVGRAMNYSYA
EVDRIAKMIPTVIGITINKALEMNAELNSLYEDDIRVEALIDIAKALEGLPRHSSTHAAG
VVIASKPLVNYVPLQKNEEMIVTQFPMGTLEELGLLKMDFLGLRTLTVMRDCVDFIKENR
NVSIDIDDLDIEDHKVYKMIGEGKTVGIFQLESAGMTSFMKELKPDNLEDIIAGISLYRP
GPMAEIPRYIRNKNSMDKVEYETPQLEEILGVTYGVMVYQEQVMEIVRKLAGYSMGRSDL
VRRAMSKKKHKVMEEERYNFIHGIVCADGTIEVEGCLRNGISEKAANRIFDQMMDFASYA
FNKSHAAAYAVVGYQTAYLMCYYPTEFIAAMLNSVKGASEKIAFYTRYAVQIGIGVLPPS
INESYAGFTVKGDTIRFGLTALKNVGVNVIDSIVKNREEKGDFTGFMDFCNKIDTSCVSK
RAVESLIKAGAFDDFKIHRSQLLAIYEKVLDGVNNDRKRNISGQINLFLDFENDYNNFEI
EYPNIKEFKKKHLLAMEKEMTGIYLSGHPLDEYEETLKIQTDTRISDIVVDESLEEGNEL
LNESFKLQDGDKVIIGGIISTVSKKVTKNNAMMAFINLEDLYASVEVIVFPKTFEKYKSL
IEEDEIVIIKGRVSIREEEQPKILCEDIKPLLKINSEKIYILIENETMMKDTLKKLKQNL
TIYRGYTPVYICTKEPRKMYVADKALWLSEETDTMEVLRGIFGKNNIKIQ
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaaaatcagagaaagaagacgtagaaaatttcgttcatctccatgtacataca
gagtatagtttgctggatggttccgggaagattaaagaactcctttctaaaaccaaggag
ttaggtatgaagagtattgctataacagaccatggagtaatgtatggctgtgtggaattt
tataagcaggcaaaggagcaaggcattaaacctattattgggtgtgaaatatatgtagct
gctaagtctatgtacataaaagaagcagatagagaaaatcaaactcatcatttagtgctt
ttagttaagaatgcattggggtatgaaaatttaatgaagatagtatctgcagcttccatt
aaaggcttttattataaaccaagggttgatcatgaatttttgtcaaagtatagtgaagga
ataatagctagtagtgcatgccttggtggtgaggttcaaagtcatcttcttcgcgataat
tatgaaaaagcaaaggaaatagcactgcaatataaagaaattttcaaagatggcttttat
ttggaattacaatatcatggtatgcaggaccaacttaaggtcaatgaacttttaattaaa
ctttcaaaggatacaggaattcctttaatttgtagtaatgatactcactatattaataaa
gaggatgcaaaggctcatgatgtgctcttatgcattcaaacagcgaaaactgtggatgaa
gaaaatagaatgagatatccatcagatgagttttatttaaaatctcctgatgaaatgaaa
aagacctttgcttatgttccagaggctttaagtaatacagtgaaaattgcagagcagtgt
aattttgattatgaatttcatgtatctaaattacctaagtttccattaccagaaaaggta
gatccttatgaatttctaagagaaaattgctacaagggtatgtcatcgctttataaggtc
tttagtgaagtacaggaaaagggtttttctatagaatatgtaaatgaaatagcgcttgga
agtgatcaggctaaagagtatgtggtcagactggaatatgaacttaatataataaagcaa
atgggatacatagattattttcttatagtatgggattttataaagtttgcagtagaacat
gatattcccacggggcctggtcgtggctctgcagcaggttctatagtggcttatgcatta
ggaataactaagatagaccctataaaatatagtcttatttttgagaggtttttaaatcca
gagcgagtttcaatgccggatatagattcggatttctgctatgaaggacgtcaagctgta
attgattatgtagttgagaaatatggatctgataatgtatcacaaattataacttttgga
actatggctccaagagcttgtataagagatgtaggaagggctatgaattattcttatgca
gaggtagatagaattgctaagatgattccaactgtaattggtataactataaataaagct
cttgagatgaatgcagagcttaactccttatatgaagatgatatacgggttgaagcactt
atagatattgcaaaggccttagagggactaccaaggcatagttctactcacgcagcagga
gtagttattgcctcgaagccattagtaaattatgttcctcttcagaaaaatgaggaaatg
atagtaacacaatttcctatgggaaccttagaggaacttgggcttttgaaaatggatttt
ttaggtcttcgaacacttacagttatgagagattgtgtggatttcataaaggaaaacagg
aatgtgagtatagatatagatgatttagatattgaagatcacaaggtctataagatgatt
ggagaaggtaaaactgtaggaatatttcaattagagtctgcaggaatgactagctttatg
aaagaattaaagccagacaatttagaagatattatcgctggtataagtttatatagacca
ggtcctatggctgagattccacgctatataagaaataaaaatagtatggataaggtagaa
tatgaaactccgcaactcgaagaaattcttggtgttacctatggtgtaatggtatatcaa
gaacaagtaatggaaattgttagaaaactagctggttattccatgggtagatcagacctt
gtacgtcgtgctatgtctaaaaagaagcacaaggttatggaagaggaacgatataacttt
atccatggaatagtctgcgcggatggaaccatagaagtagaaggttgcctccgaaatgga
atttcggaaaaggctgcaaaccgcatatttgaccaaatgatggattttgcgtcttatgct
tttaataaatcacatgccgcagcctatgcagtggttggttaccaaacagcatatttaatg
tgttattatcccacagaatttatagctgctatgctaaacagcgtaaagggtgctagtgag
aaaatagctttttataccagatatgcagttcaaattggtattggagtgctacctcctagt
ataaatgaaagttacgctgggtttaccgtaaaaggagatactataagatttggccttaca
gctttaaaaaatgtaggggtaaatgtaatagacagtattgtgaaaaatcgagaagaaaaa
ggtgatttcaccggtttcatggatttttgtaataaaatagatacctcatgtgtaagcaaa
agagcagtagaaagtcttattaaagcaggagcctttgatgatttcaaaattcataggtct
caactactagcaatctatgaaaaagtattagatggagtaaataatgatagaaagagaaat
atttctggacaaataaatttatttttagattttgaaaatgattataataatttcgaaata
gagtatcctaatattaaagaatttaaaaagaagcatcttttagctatggaaaaagaaatg
acaggaatatatttatctggtcacccactagatgaatatgaagagactctcaaaatacag
acagatacaagaatatcggatattgtggtagatgaaagccttgaagaaggtaatgaacta
ttgaatgaaagctttaaacttcaagatggggataaagttattatcggaggcataatatcg
actgtttcgaaaaaagttacaaaaaataatgcaatgatggcttttattaatctagaagac
ctatatgcaagcgtggaagtaatagtttttcctaagacctttgaaaaatataagtcctta
atagaagaggatgaaatagtaataataaaaggaagagtaagtattagggaagaagaacaa
cctaagattttgtgtgaagatattaaaccccttttaaagattaacagtgaaaaaatttat
attttgatagaaaatgaaactatgatgaaagatacgctaaaaaaattaaagcaaaacttg
accatttataggggatacactccggtatatatttgtacaaaggagccaagaaaaatgtat
gttgcggataaagcattatggctcagtgaggaaactgatactatggaagtgttaagaggt
atatttggaaaaaataacataaaaatacaataa
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