Clostridium tagluense: LL095_22400
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Entry
LL095_22400 CDS
T08715
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ctag
Clostridium tagluense
Brite
KEGG Orthology (KO) [BR:
ctag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctag03019
]
LL095_22400
Messenger RNA biogenesis [BR:
ctag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LL095_22400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
RecJ_OB
P16-Arc
G1_gp67_C
Motif
Other DBs
NCBI-ProteinID:
WAG50558
LinkDB
All DBs
Position
complement(4835563..4836525)
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AA seq
320 aa
AA seq
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MEIKKISEIKKGDRVEGFFVIKSVDIKVSNNSNTNKYFDFNLGDATGDINAKLWECNEEL
ENTLKQNILVKVKGTVNEWRGKLQLKIEMIRLAEEKDEVKIGDYVAVAPYPPEKMYDDVL
NYLSKIKNTDIQNIVTNILSDNEEKLMHYPAAKSNHHAVRAGLLYHTTTMLKAGEKLSEI
YTFLNTDLLYAGIILHDIGKIYEMNASELGIVSEYTIEGQLIGHIVQGIKMIETASIQVK
ADKEVSMLLQHMVLAHHYEAEYGSPKKPMIPEAEMLHHLDIMDARMYDMNKALTDTEQGK
FSERIWSLDNISIYKSFINK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaaaagataagtgaaataaaaaaaggtgatagagttgaaggctttttcgtt
ataaaatctgtagatatcaaggtttccaataatagtaatacaaataaatattttgatttt
aacttaggagatgctacaggcgatataaatgcaaaactttgggaatgcaatgaagaatta
gaaaatacattaaaacaaaatattttagtgaaagtaaaaggtactgtaaatgagtggaga
ggaaaacttcaattaaaaatagaaatgataaggctggcagaggaaaaagatgaagttaaa
attggtgattatgttgcagtagcaccatatccaccagaaaaaatgtatgacgatgtttta
aactatctatctaaaattaaaaatacagatattcaaaatatagttacaaatattttaagt
gataatgaagaaaagctaatgcattatccagcagctaagtctaatcatcatgctgtaagg
gcaggacttttataccatacaacaactatgcttaaggcaggggaaaaattaagtgagatt
tatacttttctaaatacggatttactatatgcaggtataatacttcatgatattggtaaa
atatatgaaatgaatgctagtgaacttgggattgtatctgaatatacaatagaaggccaa
cttataggacatatagttcaaggaattaaaatgatagaaacagcaagtatccaggttaaa
gcagataaagaggtatccatgttattacaacatatggtgctagctcatcattatgaagcg
gaatatggaagtcctaaaaaacctatgataccggaagctgagatgctacatcatttagat
ataatggatgcaagaatgtatgatatgaataaggcattaactgatacagagcaaggtaaa
ttttcagaaagaatatggtccctagataatataagtatttataagagttttataaataaa
taa
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