Chryseobacterium taihuense: NCTC12078_00309
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Entry
NCTC12078_00309 CDS
T07055
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ctai
Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_00309
Enzymes [BR:
ctai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NCTC12078_00309
DNA repair and recombination proteins [BR:
ctai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC12078_00309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
PepQ_N
Motif
Other DBs
NCBI-ProteinID:
VFB02334
UniProt:
A0A4V6ID69
LinkDB
All DBs
Position
1:complement(311075..312553)
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AA seq
492 aa
AA seq
DB search
MAKTVKHTAQLIFPHQLFEDTDYLDKNQPVFLVEEFLFFKQYSFHQQKIAFHRATMKFYE
NELKKAGFEVEYIESSSKFSDIRNLIPKLEKENFTTIKTTDVCDNWLEKRLRETKLELEI
LDSPLFINSKEELKDYFEGKKSYHQTDFYKQQRITRNILMKAGKPLGGKWTYDTENRKKY
PKNKKVPPIHFPKNNEFYEEAKQYTEKHFAKNYGTLTDEQLYPTTFKEAEQWLDQFLENR
FLEFGIYEDSIVEKEHFLHHSVLSPLMNVGLLTPESVLEKAIAFARENDIPVNSLEGFVR
QILGWREFVRGVYVYQGTYQRNKNYWKHKQKLPESFYTAETGIRPIDSSLQKILKTGYAH
HIERLMIFANFMNLAQFNPDEVYQWFMEMFIDSYDWVMVPNVYGMSSFSDGGKMSTKPYI
SGSNYIKKMSDYPDGEWNEKWDALFWNFINDNKEFFAKNPRLGMMLRTLEKMPEEKQKQH
FKTAKEFIGNLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacagtaaaacataccgcccaattgatctttccgcatcagctttttgaggat
acggattatctggataaaaatcagcctgtatttttggtagaggaatttctgttttttaag
cagtattcattccatcaacagaagattgcgtttcaccgggcaactatgaaattttatgaa
aacgagctaaaaaaagcaggttttgaggttgaatatatagaaagttcatctaaattttca
gacattcgaaatttaattccgaagcttgaaaaagaaaattttacaacgataaaaacaacg
gacgtttgcgacaactggctggaaaaaagattaagggaaaccaaattagagctcgaaatt
ttggatagtccgcttttcatcaacagcaaagaagagctgaaagattattttgaaggtaaa
aaatcttatcatcagactgatttttacaaacagcagagaatcacgcgaaatatcctgatg
aaagcaggaaaaccgttgggcggaaaatggacttacgatacagaaaaccgaaaaaaatac
ccgaaaaataaaaaagtgcctcccattcattttccaaaaaacaatgaattttacgaggaa
gcaaagcaatacaccgaaaagcattttgccaaaaattacggaacgcttacggatgaacag
ctctacccgactacttttaaggaagctgaacagtggctggatcagtttcttgaaaaccgt
tttctggaatttggcatttacgaggacagcatcgtggaaaaggaacattttctgcatcac
agcgtgctttctccgttaatgaatgtcggacttttaacgcccgaaagtgtgcttgaaaaa
gcgattgcatttgctagagaaaacgatattccggtgaattctttggaaggttttgtccgc
cagattttgggctggagagaatttgttcgcggggtttatgtgtatcagggaacgtatcag
cggaataaaaattactggaaacataagcaaaaacttccggaatctttttacaccgccgaa
acaggaatccgcccgattgacagttcgcttcagaaaatcctgaaaactggttatgcgcat
cacatcgaacgactgatgatttttgccaactttatgaatcttgcccagttcaatccggat
gaagtctatcaatggtttatggaaatgttcattgattcctacgactgggtaatggttccg
aatgtgtacggaatgagcagtttttcggacggcgggaagatgagcacgaaaccgtatatc
agcggaagcaattatattaaaaagatgagcgattatcccgatggagaatggaatgaaaaa
tgggatgctctgttttggaatttcatcaatgacaacaaagaattttttgctaaaaaccca
aggttgggaatgatgctgagaacactagagaaaatgccggaagaaaaacaaaaacagcat
tttaaaacagcaaaggaatttattggaaatcttaaatga
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