KEGG   Chryseobacterium taihuense: NCTC12078_00480
Entry
NCTC12078_00480   CDS       T07055                                 
Symbol
hsdR
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ctai  Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:ctai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ctai02048]
    NCTC12078_00480 (hsdR)
Enzymes [BR:ctai01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NCTC12078_00480 (hsdR)
Prokaryotic defense system [BR:ctai02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NCTC12078_00480 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: VFB02504
UniProt: A0A4V6IDB0
LinkDB
Position
1:512481..515498
AA seq 1005 aa
MTRENQIEESFISRLSDLKYTYRPDIRDKFSLEKNFREKFEQHNRVRLTDAEFARLRDEI
VNPDVFIASKMLREQQYFQREDGTPLHYTLVNNKDWCKNEFEVINQLRINTDNSNHRYDV
IILINGIPTVQIELKTLDITPRKAMQQIVDYKNDPGNGYTNSLLCFMQLFIVSNKSNTYY
FANNRNQHFAFNADEQFLPVYQFADEKNKKITHLDDFSDKFLAKCTLGELISKYMVLVES
EQKLLVMRPYQIYAVKAIVDCIHQNRGNGYIWHTTGSGKTLTSFKASTLLKDNPDIEKCL
FVVDRKDLDRQTREEFNKFQEGSVEENTNTETLVRRLLSTDYSDKVIVTTIQKLGLALDG
NFRKENSQTYKERLEPLKNKRIVFIFDECHRSQFGDNHKAIKEFFPNAQLFGFTGTPIFD
NNSTYKKVDGEMASYKTTEDIFEKLLHAYTITHAIDDRNVLRFHIDFYKGQGTANAKPGE
AIAQQAVAEAILEKHDLATHYKRFNAVLATASINNAIEYYNLFKTLQDKKKAENPDYVPL
NIACVFSPPAQLIAQNGDQQSQKNAADVKQLQDDLEQEKADNQINPEEKKRALVQIIADY
NKQYGTNHTINEFDSYYQNIQKRIKDHQYSNKDYPHKNKIDIIIVVDMLLTGFDSKYLNT
LYVDKNLKYHGLIQAFSRTNRVLNDTKPYGNILDFRSQQQQVNQAIELFSGEGNESKARE
IWLVEPAPAIIEKYQKAVEAMGIFMETHDLVNEPQEVYNLRGDAAKIQFVKTFKEVQRLR
TQLDQYTDLDAGQKELIEKILPEDDLRSFRSSYLETAKQLKEIQEKKGDEAPEGLQQLDF
EFVLFASALIDYDYIMGLIADNTDPKSQKQKMSKEQLIKLLSSSANLMDEKENLTEYING
LDWSKGQDEKQLKQGYETFKIEKNEKELADIANRHGLETKALKSFTDDIMSRMIFDGEKL
TDLLEPLELSWKERRVKELALMEDLVPQLKKIAEGREISGLAAYE
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgacacgagaaaaccaaatagaagaaagctttatttccagactttcagatttaaaatat
acatacagaccagatattcgggataaatttagtcttgaaaaaaactttcgtgaaaaattt
gaacagcataatcgagtgagattaactgatgctgaatttgcaagattacgagacgaaatt
gtaaatccggatgtctttattgcttcaaagatgttgcgggagcagcagtattttcaacgt
gaagacggaacgccgctacattatacattggtaaataacaaagattggtgtaaaaatgaa
tttgaagttatcaatcagctgagaataaatacggataacagcaatcatcgctatgatgtt
attatcctgattaacgggattccaactgttcaaatagagcttaaaacattagatataact
ccacgaaaagcaatgcagcaaattgtggattataaaaatgatcccggaaatggctacacc
aattctctgctttgttttatgcagttgtttatcgtgagtaataaaagcaatacgtattat
ttcgcaaacaacagaaatcagcattttgcatttaatgctgatgaacagtttcttccagtg
tatcagtttgcagatgagaaaaacaaaaagattacacatcttgatgatttctcagataag
tttttggcaaaatgtacgcttggagaattaatcagcaagtatatggttttggtagaaagt
gagcaaaaacttttggtaatgcgcccttatcaaatctatgcggtaaaagctattgtagat
tgtattcatcagaatagaggaaacggttatatctggcatacgacgggaagtggtaaaacg
ctgacttcttttaaagcttctaccttgcttaaagataatccggatattgaaaagtgtctg
tttgtggttgacagaaaagatcttgaccgtcaaaccagagaagaatttaacaagtttcag
gaaggcagtgtagaagaaaataccaatacggaaacattggtgcgcagattactttctacg
gattattcagataaagtaatcgtaacaaccattcagaaattaggtttggcattagatgga
aatttcagaaaagaaaatagccagacttataaagagcgattagaaccattgaaaaataaa
cgaattgttttcatttttgatgagtgtcaccgttcgcagtttggggataatcacaaagcg
attaaagagtttttcccgaatgcacaactttttggttttacaggaacacccatttttgat
aataattctacctataaaaaagtagatggcgaaatggcttcttataaaaccacagaagat
atttttgaaaaactattgcacgcttataccattacgcacgctatagatgatagaaatgtt
ctgcgttttcatattgatttttacaagggacaaggaacagccaatgccaaacccggagaa
gccattgcccagcaagccgtggcagaagctattttggaaaaacacgatttagcgactcat
tacaaaagatttaatgctgttttggcaaccgcttctatcaataatgcgatagaatattat
aatcttttcaaaacattgcaggataaaaagaaagcggaaaatccggattatgttccttta
aatattgcctgcgttttttcacctcctgcacaattgattgcacaaaatggagatcagcag
agccagaaaaatgcggcagatgtaaaacagttgcaggatgatttggaacaggaaaaagca
gataaccaaatcaatccggaagaaaagaaaagagcattagtacagattattgcagattat
aataagcagtatggtacaaaccataccattaatgaatttgacagctattatcaaaacata
caaaaaagaataaaagaccatcaatatagcaacaaagattatccacacaaaaacaaaata
gatattattattgttgtagatatgttgctgacaggttttgattctaaatatctcaatacg
ctgtatgtcgataaaaacctgaaatatcacggattgatacaggcattttcaaggacgaac
agagtgctgaacgataccaaaccttacggtaatattttagattttcgatcacagcaacaa
caggtgaatcaggcaattgaattgttttcaggtgaaggtaacgagagcaaagccagagaa
atctggttggtggaacctgctcctgctattattgagaaatatcaaaaagcggtagaagca
atgggaatctttatggaaacccacgacttggttaatgagccgcaggaagtctataacctg
agaggtgatgccgctaaaatacagtttgtaaaaacttttaaggaagtacagcgtctgaga
actcagctggatcaatatacagatctggatgctggacaaaaagaattgatcgaaaagatt
ttgccggaagatgatctgcgttcgttccgaagctcttatctggaaaccgctaaacagctg
aaagaaatacaggagaaaaaaggcgatgaagcaccggaaggtttgcagcagctggatttt
gaatttgtattgtttgcttctgcgctcatagattatgactacattatgggattgattgca
gataataccgatcctaaatcccaaaagcagaaaatgagcaaagagcagttgataaaattg
ctcagttccagtgccaatttaatggatgaaaaagaaaacctgaccgaatacatcaacgga
ttggattggagtaaaggacaggacgaaaaacaattgaagcaaggctacgagacttttaaa
attgaaaaaaatgaaaaagaattagccgatattgccaacagacacggtttagaaaccaaa
gcattaaaatcttttacggatgacattatgagccggatgatttttgatggtgaaaaactg
accgatctgttagaacctttagaattaagctggaaagaaagacgggtaaaagaattggct
ttaatggaagatttagtaccacaattgaaaaaaatagcggaaggaagagaaatctccgga
ttggcggcttatgagtaa

DBGET integrated database retrieval system