Chryseobacterium taihuense: NCTC12078_00728
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Entry
NCTC12078_00728 CDS
T07055
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ctai
Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_00728 (phrA)
Enzymes [BR:
ctai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC12078_00728 (phrA)
DNA repair and recombination proteins [BR:
ctai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC12078_00728 (phrA)
Prokaryotic type
NCTC12078_00728 (phrA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
VFB02748
UniProt:
A0A4U8WJ41
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All DBs
Position
1:775964..777253
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AA seq
429 aa
AA seq
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MNRINIFWFRRDLRLNDNTGLNEALNAGRKVVPVFIFDTEILDKLTNKEDKRLDYIHQCL
DLINKQLKEHRSTLKIYHGKPLEVFKKIISEFDVETVFCNRDYEPYARKRDHEVSEYLKE
NNIDFKDYKDQVIFEKDEVVKDDGLPYTVYTPYSKKWKILLRKTELKMSSANFENLKTQT
FEEIPDLDDIGFKKTDYRFVQPLLDKKKIESYDKNRDFPALDDTTRLGIALRFGTISVRE
CVNFAAKYNEIWLNELIWREFFMQILYHFPKVIKKCFKEKYENIEWRNNENEFKLWCEGK
TGYPIVDAGMRQLNETGFMHNRVRMITASFLTKHLLIDWRWGEAYFAEKLLDYELSSNNG
NWQWAAGCGCDAAPYFRIFNPYEQTKKFDKDQKYIKTWLSEKDIDMPPIVEHKAARERVL
KIYKKAVSD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggattaatatattttggttcagaagagatcttcgtcttaatgacaatacagga
ttaaacgaagcattaaacgccggccggaaagtagttccggtttttatttttgatacagaa
attttggataagctgaccaataaagaggataaaaggctagattatattcaccaatgtctg
gatctgataaataaacaactgaaagaacatcgcagtactttaaaaatttaccacggaaaa
cctttggaagttttcaaaaaaatcatcagtgaatttgatgtcgaaaccgttttctgcaac
cgtgattatgaaccttatgccagaaaaagagatcatgaagtttcagaatatttaaaggaa
aataatattgatttcaaagattataaagatcaggtcatttttgagaaagatgaggtagtg
aaagatgatggtctaccctatacggtttatactccgtactcaaaaaaatggaaaatcctt
ttgagaaaaactgaactcaaaatgtcttctgctaattttgaaaacttaaaaactcagacc
tttgaagaaatacctgatctggatgatattggatttaaaaaaacagattacagatttgta
cagcctctattagataagaaaaaaatagaatcttacgacaaaaacagagattttcctgca
ttagatgatacaacgagactgggaattgcacttcgtttcggaacaatttcggtgagagaa
tgtgtaaattttgctgcaaagtacaatgaaatatggctgaatgagctaatctggagagag
tttttcatgcagattctttatcattttcctaaagtcattaaaaaatgctttaaggaaaaa
tatgaaaatattgaatggagaaataatgaaaacgaatttaaactctggtgcgaaggcaaa
acaggatatcctatcgtagacgcgggaatgagacagctcaatgaaacgggctttatgcat
aaccgtgtccggatgattacggcaagctttcttaccaagcatcttcttatcgattggcga
tggggtgaagcatattttgcagaaaaacttttagactacgagctttcttccaacaacgga
aactggcagtgggcagcaggctgcggatgcgatgcagctccatatttcagaatttttaat
ccttacgaacaaacaaagaaatttgataaggatcaaaaatacattaaaacctggctgtcg
gaaaaagatatagatatgcctcctattgttgaacataaagcagcaagagaacgtgtcctg
aaaatatataaaaaagctgtttccgattaa
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