Chryseobacterium taihuense: NCTC12078_00913
Help
Entry
NCTC12078_00913 CDS
T07055
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ctai
Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctai03009
]
NCTC12078_00913 (rimO)
Enzymes [BR:
ctai01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC12078_00913 (rimO)
Ribosome biogenesis [BR:
ctai03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC12078_00913 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
VFB02927
UniProt:
A0A1G9MB56
LinkDB
All DBs
Position
1:complement(968628..969929)
Genome browser
AA seq
433 aa
AA seq
DB search
MRTKSVGKKKINIVTLGCSKNVYDSEVLMSQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILDFVEAKNRGEVEKVFVTGCLSERYKPDLVKEIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVQEAQKLA
KVGVKELILIAQDLTYYGLDIYKRRALGDLLKELVKVEGIEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLTKFREKVPDMAIRTTLIVGYP
GETEEIFQELKEWVKMQKFDRLGCFTYSHEENTTAYVLEDDIPQEVKEARVEEIMELQSQ
ISWEKNQAKIGEVYKCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAENTYISIGEFAHVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaagtctgtaggaaagaagaaaataaatatcgtcacattaggatgctccaaa
aatgtttacgattcagaagtgctgatgagccagctgaaggccaacggaaaagaagttgtg
cacgaagataaaggagacattgtggtaatcaatacctgtggttttatagacaatgctaaa
gaagaatcaatcaacacgatacttgattttgttgaagccaaaaatcgtggtgaggtagaa
aaagttttcgttacaggatgtctttcggagagatacaaaccggatttggtaaaagagatt
ccggatgtagaccaatattttgggacgagggatcttccgattttgttgaaacatttaggg
gcagattataagcatgaattggtgggcgaaaggctaacaactacaccgaaacattatgct
tacctaaaaatttctgaaggttgcgacagaccctgctcattctgtgccatccctttgatg
agaggcggtcacgtgtctacaccaattgaaaaattagtacaggaagctcagaagctcgca
aaagtcggagtaaaagaactaattcttattgctcaggatttgacctattatggtttggat
atatataaaagaagagctttgggcgaccttttaaaagagctggtaaaagttgaaggaatc
gaatggattcgtcttcattatgcctttcctagcggttttcctgaagatgtactggatatt
atccgtgaagaaccaaaagtttgcaattatatagatattccgcttcagcacattaattca
gatttgcttaaatccatgaaaagaggaacgactcatgaaaaaacagatgctcttttgacc
aagttcagagagaaagttccggacatggcaatcagaacgactttaattgtaggttatccg
ggggaaactgaagaaatatttcaggaattgaaagaatgggtaaaaatgcagaagtttgac
agattggggtgctttacgtattctcatgaagaaaataccactgcttatgttttagaagat
gatattcctcaagaagtaaaagaagcaagggtagaagaaatcatggagcttcagtctcag
atttcatgggaaaagaatcaggcaaaaataggagaggtttataagtgtatttttgaccga
aaggaaggaaattattttgtaggacgtactgaatacgattctccggatgtggataatacc
gtattggtttctgccgaaaacacgtatatctcaattggtgaatttgcccatgtcaagatt
acttcagccgaagaatttgacctgtatggtgaattgatctag
DBGET
integrated database retrieval system
