Chryseobacterium taihuense: NCTC12078_01091
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Entry
NCTC12078_01091 CDS
T07055
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai03030
DNA replication
ctai03410
Base excision repair
ctai03420
Nucleotide excision repair
ctai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12078_01091 (polA)
03410 Base excision repair
NCTC12078_01091 (polA)
03420 Nucleotide excision repair
NCTC12078_01091 (polA)
03440 Homologous recombination
NCTC12078_01091 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctai03032
]
NCTC12078_01091 (polA)
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_01091 (polA)
Enzymes [BR:
ctai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12078_01091 (polA)
DNA replication proteins [BR:
ctai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC12078_01091 (polA)
DNA repair and recombination proteins [BR:
ctai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC12078_01091 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12078_01091 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_H_2
HHH_2
DUF2202
ACS_CODH_B_C
Motif
Other DBs
NCBI-ProteinID:
VFB03103
UniProt:
A0A4U8WAK6
LinkDB
All DBs
Position
1:complement(1167777..1170614)
Genome browser
AA seq
945 aa
AA seq
DB search
MEATQDKRLFLIDAYAMIFRGYYALIRSPRITSTGIDTSAIFGFTNSLIELIRRERPSHL
AVVFDVGEASVRTTDYVEYKANRSETPEAITIALPYIKRILEAMHIPHLGVPGYEADDVI
GTIACKAEKEGYTTFMVTPDKDFAQLVTDKIKIYKPGLKGGDIEILGVDEVKAKYEIQDP
KQVIDFLAMMGDAVDNIPGLEGVGEKTAMKFLKEFGSIENLLANTHQLKGKLKEKVEASA
ERGILSKKLATIICDAPIEFHQEQYDLETPDFEKVKEVFDEIEFRRLYENLYRAFAPAET
TVAKPEGNNEKEKQTPQQKVAANVGQLDLFATYEELDQATSTKSTIEDNDHLYQFINNPK
AQKILVQNLLLQKAVCFDTETTSLNEMEAELVGMSFSYKKGLAYYVPLSEDQGEVLQTLE
IFRPFFEKEDVIKIAHNLKYDYKILQQYNITVKGAMFDTMIAHYLLNPDGRHGMDYLSEV
YLGYKPVSIETIIGKKGKKQGNFRDADLRTQTDYAAEDADVTFQLYELFAPQLKKENLED
LFFKIEMPLMEVLAKMELAGIALDEKWLAQESIDLENDLRQLESKIFEISGEEFNMNSPR
QLGEILFEKMQLDPKAKKTKTGQYATSEDILQKLASKHEIIQHILEYRTYQKLKSTYVDA
LPSQIDKDDNRVHTNFSQTTAATGRLASVNPNLQNIPIRTLRGQQIRGAFVSGEGKKIIS
ADYSQIELRLIAEISGEDNMIKAFQNGEDIHASTAAKLFKIPLEEVSKTQRSQAKTVNFG
IIYGQGAFALAEQTGLSRTEAKQMIEAYFETYPKLKAYMSEQVAKARELGYVETILGRKR
HLKDINSGNFVVRGHAERNAVNAPVQGSAADVVKMAMIKIDKELEAQNLQTKMLLQVHDE
LLFEAPVEEVETATQLIKKEMESAIETKVPLLVEVGVGNNWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaacacaagataaaaggctttttctcattgatgcatatgcaatgattttcagg
gggtattatgcattgatcagaagtccgagaattaccagtacaggaattgatacatcagca
atcttcggatttaccaattctttgatagaattaattagaagggaaagaccttcgcatttg
gctgtggtttttgatgttggtgaagcaagtgttcgtaccaccgattatgttgaatataag
gccaacagaagtgaaacaccagaagccataacaattgctcttccttacataaaaagaatt
ttggaagccatgcatattccgcatttgggtgtgccgggttacgaagcagatgatgttata
ggaactattgcctgcaaagcagaaaaagaagggtatacaacttttatggtaacaccagac
aaagattttgcccagttggttacggataaaataaaaatttataaacccggtttgaaggga
ggagatatagaaattttaggtgttgatgaggtaaaagctaaatatgaaattcaagatccg
aaacaggtcattgattttttagccatgatgggagatgctgttgataatataccgggattg
gaaggcgttggcgaaaaaacagcaatgaaattcctcaaagaatttggaagtattgaaaat
cttttggctaatactcatcagcttaagggaaagttgaaagagaaagtggaagcatctgca
gaacgtgggattttatctaaaaaactggctacaattatctgtgacgctccaattgaattt
catcaggaacaatacgatctggaaactccggattttgaaaaagtaaaagaagtttttgat
gaaatagagttcagaagactatatgaaaatctgtaccgtgcttttgctccggctgaaacc
actgttgcaaaaccggaagggaataatgaaaaagaaaagcagactccacagcagaaagtt
gcagcaaacgttggtcagttagatctttttgctacctatgaagaacttgatcaggcaact
tccaccaaatcaactattgaggataacgatcatctgtaccagtttataaacaatccgaaa
gcgcagaaaattttagttcagaatttattgctccaaaaagcggtatgctttgatacagaa
acaacttcgcttaacgaaatggaggccgaattagtaggaatgagtttctcctataaaaaa
ggtctggcttattatgtcccgctttctgaagatcagggtgaggttttgcagactttggaa
atcttcagaccgtttttcgaaaaagaagatgtgatcaaaattgctcataacctaaaatat
gattacaaaattcttcagcaatacaacattaccgtaaagggagcgatgtttgatacgatg
attgcccattatcttctcaatcccgatggaagacacggaatggattatctttctgaggtt
tatcttggatataaacctgtttccattgagacgattatcgggaaaaaaggaaaaaagcag
ggtaatttcagagatgccgatcttagaacacagactgattacgcagcagaagatgctgat
gtaacttttcagctatacgaattgtttgcgccccagcttaagaaagaaaatcttgaagat
ttattttttaaaatagaaatgccgctgatggaagttcttgctaaaatggaattggcggga
attgctcttgacgaaaaatggctggctcaggaaagtattgatctggagaatgatttaaga
cagctggaatcaaaaatttttgaaatttcgggcgaagaatttaatatgaattctccaaga
cagttgggagagattttgtttgaaaaaatgcagcttgatccgaaagctaagaagacaaaa
accggtcagtatgcaacttctgaagacatattgcagaagctggcttcaaaacacgaaatc
attcagcatattttagaatatagaacatatcaaaagctgaaatctacctatgtggatgca
ctgccgtcacagattgataaagatgataaccgcgttcataccaacttttcacagacaacg
gctgcaacaggccgtctggcgagtgtgaatccgaatttacagaatattccgattcgtact
ttaaggggacagcagattcgtggtgcatttgtttccggtgaaggaaagaaaatcatttct
gccgattattctcagattgaacttcgtttaattgcggaaatttccggtgaagataatatg
attaaagcttttcagaacggagaagatattcacgcttctacagcagcaaaattatttaaa
attccgttggaggaagtgtctaaaacgcagagaagtcaggcaaaaacggtcaacttcgga
attatttacggacagggtgcttttgctttggccgagcagaccggactttcaagaaccgaa
gccaagcagatgatcgaagcctattttgaaacctatccgaaactgaaagcgtatatgtct
gaacaggtcgctaaagcccgtgaactgggatatgtagaaactatattgggcagaaaacgt
catttgaaagatatcaattccggaaattttgtggtaagagggcatgctgaacgaaatgct
gttaatgctccggtacagggaagtgcggcagatgtagtaaaaatggcaatgattaaaata
gacaaagaacttgaagcacagaatcttcaaaccaaaatgttgttgcaggtacacgacgaa
ttattatttgaagctccagttgaagaagtagaaactgctacacagctcatcaaaaaagaa
atggaatctgctattgaaacaaaggttccgttactggttgaagtgggcgtaggaaacaac
tggctggaagcacattaa
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