Chryseobacterium taihuense: NCTC12078_01298
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Entry
NCTC12078_01298 CDS
T07055
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12078_01298 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_01298 (exoA)
Enzymes [BR:
ctai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NCTC12078_01298 (exoA)
DNA repair and recombination proteins [BR:
ctai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC12078_01298 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Herpes_IE2_3
Motif
Other DBs
NCBI-ProteinID:
VFB03293
UniProt:
A0A4U8WB14
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All DBs
Position
1:1391010..1391774
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AA seq
254 aa
AA seq
DB search
MRLITYNVNGIRAAFTKDFLNWLKTADPDIICIQESKAGTDQIDIESLEKAGYYSYWHSA
VRKGYSGVGIASKIKPRHVEYGCGIENYDNEGRIIRADFEGFSVISVYVPSASNIERLDF
KMQFCYDFLDYIKNLKKNIPNLIISGDFNICHQAIDIHDPVRLKNVSGFLPMEREWMSRF
IDECELIDSFRYFNAEPDNYTWWSYRQNSRAKNKGWRLDYNFTSYSLKDQLSRAVILKEA
VHSDHCPALVEIMV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagattaatcacctacaacgtcaacggaatacgagctgcatttaccaaagatttttta
aattggctgaaaactgctgacccggatattatctgtattcaggaaagtaaagcaggaacc
gaccaaattgatatcgaaagccttgaaaaagctggctattacagttattggcattccgca
gtaaggaaaggctacagcggagtgggaattgcttcaaaaataaaaccgcgtcacgtagaa
tatggctgtggtatagaaaattatgacaatgaaggaagaataatccgtgcagactttgaa
ggattttcggttatttcagtatacgttccgtctgcttcaaatatagaaaggctggatttt
aaaatgcagttctgctatgattttttagattatattaaaaacctaaaaaagaatatccct
aatcttattatttcaggagattttaatatctgtcatcaggcgatagatattcatgatcct
gtacgtcttaaaaatgtatcaggatttctaccgatggaacgtgagtggatgagtcgtttt
attgatgaatgtgaactgatcgacagtttcagatattttaacgccgaacctgataattat
acctggtggagttaccgacagaattccagagctaaaaacaaaggatggcgtttagattac
aacttcacttcgtattcactgaaagaccaattatcccgtgctgttattttaaaagaggca
gtgcattctgatcactgccccgctttagtcgaaattatggtataa
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