Chryseobacterium taihuense: NCTC12078_01539
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Entry
NCTC12078_01539 CDS
T07055
Symbol
uvrD
Name
(GenBank) DNA helicase II
Organism
ctai
Chryseobacterium taihuense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
L_protein_N
Terminase_6N
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VFB03524
UniProt:
A0A4V6IDH5
LinkDB
All DBs
Position
1:complement(1640627..1643770)
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AA seq
1047 aa
AA seq
DB search
MSNSYTVINASAGSGKTYALVQRLLMICLRYPNQQQIIRNILALTFTNKAANEMKERILS
WLGKFTAENYTDNNDLKNIQKAFEDEDLKITLDELHHRSKKLLDYILHNYSTLNIGTIDR
FNSRLVRSFSYELGLAKNFNLEIDAEPFLIEAVDKMLDQIGENDKISDSFMDYVDYSLDN
NERINLNKNLYDSAKEFVKDIHYEHLKNNNEFDDQNYESIKNSLRTEISDNKKRSLALAL
ESIQLFRNRNIEVEDFAQGKNGLGGFFVKAIEFYEKKRSAFPFPSSTEESVVEKYRKGCS
AKSKHKEAEISEILEQLLENRMKLILLYIETQKKEKILSALLPLKVNKDIQDQLRQIESE
NDLVLLSKFNILINENLKNEPSAFIYEKVGSQFQHYFFDEFQDTSELQWQNFVPLRDHSI
STENTSFTLVGDPKQSIYRFRGGESKLMLDIINNTEISPKQADLLVLKDNWRSARNIVKF
NNELYHFHSQNLHDEHRQIFGSDGEQNPKSSIDGRVKVNLVENLTNEEFYDDVSLKMQKD
IQECLDNGFRFSDITILCRGNFDIFSYSQKLGNLKVTYNGTETNIKTISDKGLTLELSDT
IKAVVEYLKWETNPKNKPHLMMMMFYLNRLGRITMPDFTFGMKEILFLDTHEEIISFIEN
KYSLQLRQDKFPKFNLYNFIEYYINEFSFENKETDFLLNFLEMLFNFTQNAGASTKEFLK
YWDEEASKHTIQASENIDAIQIMTIHKAKGLEFPVVFIPMMNKNRDSEFSNWFETDTESA
LKSVNINQFSKNLEAYDEGIEKFNLENSYKNLVDRLCLQYVATTRPVEQLFFYLQKQNKT
SNNLEILEFVQSKNPQNLDEFDVYETSPEMLKKQIVHPYSEFKTQNIHKLRNKHEGTDSV
KIATPSKNYQVRNEKVRIGLFVHELLSKINTEKDIDKVLEAYVLEGQITLDERAEIKSDL
MKIIIDHSKFFDEKWKVINEKDIMITENGVSQIYRPDRILENNEGYVILDFKTGQPTEKD
ERQIQMYKNVLEKLGRKVLKTKLIYIS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcttatacagtcatcaatgcttctgcgggatccggaaaaacgtatgctctt
gtacagagactattgatgatctgtctcagataccccaatcagcagcagatcatcagaaat
attctggctctgacctttacaaataaggctgccaacgaaatgaaagaaagaattctttca
tggctcgggaaatttacagcagaaaactatacggataataatgatcttaaaaatattcag
aaagcatttgaagatgaagatctaaaaatcacattggatgagcttcaccatcgctcaaaa
aaacttctggactatattcttcataattattcgacactgaacatcggaacaatagaccgt
tttaattccagattggtgcgaagcttttcttacgaactgggtctggcgaaaaattttaat
cttgaaattgatgccgaaccttttttgattgaagcggtagataaaatgctggatcagatt
ggtgaaaatgataaaatttcagattcttttatggattatgtagattacagtctggataat
aatgaaagaattaatctcaataaaaacctgtacgattctgcgaaggaatttgtgaaagat
attcactatgagcatcttaaaaacaataatgaatttgatgaccagaattatgaaagcatt
aaaaacagtttacgaactgagatttctgataataaaaaaagatctttagcacttgctctt
gaatctatacagctattcaggaacaggaatattgaagttgaggattttgcacagggaaaa
aacggattgggtggtttttttgtaaaagcgatagaattttatgagaaaaagagatcagca
tttccttttccaagctcaaccgaagaatctgttgtagaaaaatacagaaaaggctgctct
gcaaagtcaaaacataaagaagccgaaatttcagaaattctggaacagctcctggaaaac
aggatgaagctcattttactctatattgaaactcaaaagaaagaaaaaattctttcggca
ttgcttcctttgaaggtgaataaagatattcaggatcaactcagacagattgagagtgaa
aatgatctggttctgttgtctaagtttaatattttaatcaatgaaaatctgaaaaacgag
ccgtctgcatttatttatgaaaaagtaggttctcagtttcaacattatttttttgatgag
tttcaggatacttcagagttacagtggcagaattttgttccgttgagagatcacagtatt
tcaacagaaaatacttcttttactttggtgggagatcccaaacagagtatttaccgcttt
cggggcggcgaaagcaaactaatgcttgatattatcaataacaccgagatttctccaaaa
caggcagatttacttgtgctgaaagataactggcgcagcgcaagaaatatcgtgaaattt
aacaatgaattgtatcattttcattctcaaaatcttcatgatgagcatcggcagattttc
ggatccgatggagaacagaatcccaaatcgtctattgatggaagggtaaaggtgaatttg
gttgagaatttaaccaatgaagaattttacgatgatgtttcactcaaaatgcagaaagat
atacaggaatgtctggataatggatttcgcttttctgatatcactattctgtgccgcgga
aattttgatatattttcatattcacagaagcttggaaaccttaaagttacttacaacgga
acagaaactaatattaaaactatttcggacaaaggtcttactctggaattatcagatact
ataaaagcggtggttgaatatctgaaatgggaaaccaatcccaaaaataaaccgcatttg
atgatgatgatgttttatctcaacaggttgggaagaattaccatgcctgattttactttt
gggatgaaggaaattctttttttagatacacacgaggaaattatcagttttatagagaat
aaatacagtctgcagctcagacaggataaatttcccaaatttaacctgtataattttata
gagtattacatcaacgaattttcttttgaaaataaagaaacagattttctcctgaatttt
ctggaaatgctttttaatttcacccaaaatgctggagcgagtaccaaagagtttctgaag
tattgggatgaagaagcttctaaacataccattcaggcatcagaaaatattgatgctatt
cagatcatgacaattcacaaagcgaaaggacttgaatttcctgtagtttttattcctatg
atgaacaaaaacagggactctgaatttagcaattggtttgaaacagatacagaaagtgct
ttgaagtcagttaatatcaaccaattcagcaaaaacctcgaagcatacgatgaagggatt
gagaaatttaatctggaaaattcgtataaaaatctggttgacaggctgtgtctgcaatat
gtagcaactacaagacctgtagaacagttgtttttttatcttcagaagcaaaacaaaaca
tccaataatcttgaaattctggaatttgttcagtctaaaaatcctcagaatcttgatgag
tttgatgtgtatgaaacttctcctgaaatgctgaaaaagcaaattgttcatccttattct
gaattcaaaacccagaatattcataaattacgtaataaacatgaaggaacagattccgta
aaaatagcaacgccgtcaaaaaattatcaggtacgaaatgaaaaagtgagaatcggtctt
ttcgtgcacgaactgctgtcaaaaataaatactgaaaaagatatagataaggttttggaa
gcttatgttttggaaggtcagattacgcttgacgaaagagctgaaattaagtcagattta
atgaaaatcattatagatcattctaaattttttgatgaaaaatggaaagttattaatgaa
aaagacatcatgattactgaaaatggagtcagtcagatttaccgtcctgaccgaattctg
gaaaataatgaaggctatgttatcctagattttaaaacgggacagccaacagagaaagac
gaaaggcagattcagatgtataaaaatgttcttgaaaaactgggcaggaaagttttgaaa
acgaagttgatatatatatcttaa
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