Chryseobacterium taihuense: NCTC12078_01639
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Entry
NCTC12078_01639 CDS
T07055
Symbol
agaA
Name
(GenBank) Alpha-agarase precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ctai
Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctai02000
]
NCTC12078_01639 (agaA)
Transporters [BR:
ctai02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC12078_01639 (agaA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
VFB03623
UniProt:
A0A4U8WBY0
LinkDB
All DBs
Position
1:complement(1742198..1743673)
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AA seq
491 aa
AA seq
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MKNLKLGISALALTVASTVFAQTTNNPWLIGVGAHAENHTAQRSNFSNTFSATNLTKNMF
NVNNFSITPPLSKLTVARNVGKGLVIDWQTTVGNVENKRFNMGKEFFLQTGLGFQFKAAG
LLWDEESWFDPYLRVGANYLRHDYTGLSFPRQALINGNPAEMISNGENGNEMGKANFLTV
STGAGLNLWLTKNFGLGVQGDYVSTPGDKSNVANFWQASATLNFRFGNRDRDKDGILDKD
DLCPDTPGLPEFQGCPDTDGDGVPDKDDQCPDVAGPVENNGCPWPDTDGDGVIDKDDACP
TVAGPAENNGCPWPDTDGDGILDKDDACPTVPGVAEYNGCPPPPKPKPIDVTITEEFRDL
LFDFNKATIRKESSGKLDTAAKIIKDAPAENFVIIGMTDKKGSDSYNLNLSRQRAAAVVA
ALEARGVNPAVLKSIGIGEQEATVPETASDAERQADRKVIVRAISGSEWETYKKSDLPAT
PKKKAPAKKRK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaaaattaggaatttcagcattggcgcttacggttgcctctactgttttc
gctcagacgaccaacaatccgtggttaatcggagttggtgcgcatgcggaaaaccataca
gcacaacgtagcaatttcagcaatacgttctctgctactaatttgacgaagaatatgttc
aatgtgaacaacttctcaattacacctcccttatcaaaattaactgttgcaagaaacgtt
ggtaaaggtttggtaatcgactggcagactactgtaggtaatgttgaaaacaaaagattc
aacatgggtaaggagtttttccttcagacaggtcttggtttccaatttaaggcagcgggt
cttctttgggacgaagagtcttggtttgatccatacttaagagttggtgctaattaccta
agacatgattatacaggtctttctttccctagacaggctttaatcaatggtaatccagct
gagatgatcagcaacggagaaaacggaaacgaaatgggtaaagctaatttcttaactgtt
tctactggtgcaggtcttaatctttggttgactaagaactttggtcttggtgtacaagga
gattacgtttcaactccaggtgataaatctaatgttgcgaacttctggcaagcttcagct
acattgaacttcagattcggaaacagagacagagataaggatggtatcttagataaagac
gatttatgtccagatactccaggtttaccagaattccagggatgtcctgatacagatggt
gacggagttccagataaagacgatcaatgtccagatgttgcaggtccagttgaaaacaac
ggttgtccttggccagatacagatggtgacggtgtaatcgacaaagatgacgcttgtcct
acagttgcaggtccagctgaaaacaatggttgtccttggccagatacagatggtgacggt
atcttagataaagatgacgcttgtcctacggttcctggtgttgctgagtacaacggatgt
ccacctccaccaaaaccaaaaccaattgatgtaactattactgaagaatttagagatcta
ttatttgatttcaataaagcaacaatcagaaaagaatctagcggtaaattagatacagct
gctaaaattattaaagatgctccagctgaaaacttcgtaattattggtatgactgataag
aaaggaagtgattcttataacttgaatttatcaagacaaagagctgctgcggtagttgct
gctttagaagctagaggtgttaaccctgctgtattgaagtcaattggtatcggtgagcaa
gaagctacagttcctgaaactgcttctgacgctgaaagacaagctgacagaaaagttatc
gtaagagctatctcaggatctgagtgggaaacttacaaaaaatctgacttgccagctact
cctaaaaagaaagctccggctaaaaaaagaaaataa
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