Chryseobacterium taihuense: NCTC12078_01943
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Entry
NCTC12078_01943 CDS
T07055
Symbol
msbA_1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC12078_01943 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctai02000
]
NCTC12078_01943 (msbA_1)
Enzymes [BR:
ctai01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCTC12078_01943 (msbA_1)
Transporters [BR:
ctai02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC12078_01943 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_22
AAA
nSTAND3
RsgA_GTPase
ABC_ATPase
AAA_18
AAA_25
AAA_15
DEAD
SRP54
AAA_5
AAA_29
AAA_23
APS_kinase
AAA_16
TsaE
CbiA
ATP-synt_ab
AAA_17
AAA_30
NACHT
PPV_E1_C
Motif
Other DBs
NCBI-ProteinID:
VFB03920
UniProt:
A0A4U8WEV9
LinkDB
All DBs
Position
1:2057615..2059453
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AA seq
612 aa
AA seq
DB search
MNEYRKILKFARPHQKYIYGSLFFNLLYSVFQIASLGTILPVLGMLFGTIKPEKYDSAPV
YSGNVLDLFSYLKDYSNYYIQTLVADYGSLKVLAWLCIVTAFMFFLRNVFRYLGSFLLIN
YRVGVTKDLRGEMYRKVLSLPVSFFTDSRKGDMMSRMSNDVGDVEGNILGSLVELINAPF
MLISTLITLFWLSPEMTLFSLLVLPVMGTLIALIGKSLKKDSHEAQHEMGTIFSIVDETL
KSSKVIKIFSAEKIMNTRFMGSMQKWINSSIRLGRKKELASPMSEFLGSVTFLIIAWYGG
KQIIVDQSISPADFLVFLGIFFQILPPVKTLSSSISNVQKGEASLKRVLEILEADVKIEE
IAEPVSISTLNNHIEFKNIGFYYDKSNLILKNFNLTIPKGKTVALVGQSGSGKTTIANLL
ARFYDVSEGQILIDDTDIKHLKLKDYRKLLGMVTQESVLFNDTVYNNILMGKPEATRDEV
IAAAKIANADTFILQLPNGYETNIGDDGGKLSGGQKQRVSIARAVLKNPPIMILDEATSA
LDTESEKFVQDALEKMMENRTSLVIAHRLSTIQKADWIVVMEKGDIVEQGSHQELMAQKG
VYHKLVELQNFD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatatagaaaaatattaaaattcgcaagacctcatcaaaaatacatctacgga
agtttgttcttcaatctcttgtattcggtatttcagattgcatctctaggtaccattctg
ccggttttaggaatgctgtttggtaccataaaaccagaaaagtatgactctgcccctgtt
tattcaggtaatgttctggatttattttcatatctgaaagactattccaattactacatc
cagactttagtagccgattacggatctctcaaagttctggcgtggctttgcattgtcacg
gcatttatgttttttctgagaaatgttttcagatatttgggatcttttcttttgattaat
tatcgtgtaggagttaccaaagatcttcgaggcgaaatgtacagaaaagttttgtctctt
cctgtttcattctttaccgacagcagaaagggtgatatgatgtccagaatgtccaatgat
gttggcgatgtggaaggtaatatattgggaagcttagtggagcttatcaatgctcctttt
atgctgataagtacgctgataactttattttggctaagtcccgaaatgacgcttttttct
cttttggtattaccggtaatgggaaccctaattgctctgatcggcaaaagccttaaaaaa
gattcgcatgaagctcagcacgaaatgggaaccatattttctattgttgatgagactttg
aaatcatcaaaggtgattaaaattttcagtgcagaaaagataatgaataccagatttatg
ggatcaatgcagaagtggatcaacagttctatcagattgggaagaaagaaggaacttgcc
tccccgatgagcgaatttctgggttctgtaacctttctgattattgcgtggtacggagga
aaacaaatcattgtagatcaaagtatctctccagcagattttcttgtttttctaggaatt
ttcttccagattttacctcctgtaaaaacattatcctcttctatttctaatgtgcagaaa
ggtgaagcatcactcaaaagagtactggaaattctggaagccgatgtaaagattgaagaa
atcgccgaacctgtttctatttctacactgaataaccatattgagtttaaaaatattggg
ttctattatgacaaatctaatttaattttaaagaactttaatcttacaattcccaaaggt
aaaacagttgctcttgtcgggcaaagcggaagcggaaaaacaaccattgccaatcttctg
gcaagattttatgatgtttctgaaggtcagattctgattgatgacaccgacatcaaacat
ctgaagcttaaagactatagaaagcttttaggtatggttactcaggaatcggtattattc
aacgatacggtgtacaacaatattctgatgggaaaacccgaggctacaagagatgaagtg
attgctgctgctaaaattgccaatgcggatacttttattttacagcttcccaatggttat
gaaaccaatattggagatgatggcgggaagctttccggcggacagaaacaaagggtttct
attgcaagagctgttctcaaaaacccaccgattatgatcctggacgaagctacttctgct
ttggatacagagtctgaaaaatttgtgcaggatgccctggaaaaaatgatggaaaaccgt
acatcactggttattgcccatcgtctttcaactattcagaaagctgactggattgtggtc
atggaaaaaggcgacatcgtagaacagggaagccatcaggagctaatggctcaaaaaggt
gtttaccataaattggttgaacttcagaattttgattaa
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