Chryseobacterium taihuense: NCTC12078_02202
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Entry
NCTC12078_02202 CDS
T07055
Symbol
alr
Name
(GenBank) Alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai00300
Lysine biosynthesis
ctai00470
D-Amino acid metabolism
ctai00550
Peptidoglycan biosynthesis
ctai01100
Metabolic pathways
ctai01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC12078_02202 (alr)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC12078_02202 (alr)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC12078_02202 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCTC12078_02202 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ctai01011
]
NCTC12078_02202 (alr)
Enzymes [BR:
ctai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NCTC12078_02202 (alr)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NCTC12078_02202 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
ctai01011
]
Precursor biosynthesis
Amino acid ligase
NCTC12078_02202 (alr)
Racemase
NCTC12078_02202 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
NADH-UOR_E
Uds1
Motif
Other DBs
NCBI-ProteinID:
VFB04179
UniProt:
A0A4U8WP55
LinkDB
All DBs
Position
1:complement(2326472..2328919)
Genome browser
AA seq
815 aa
AA seq
DB search
MNYTVEDIAKITNAKIIGDKELLIKNIAFDSRTIYSTKNTAFIAINTHKNSGEKFIESAI
DKGINIIISENHYSQFEDITWIIVENSVMFLQKLAKFHFENSHIKSVGITGSNGKTILKE
WLYQCLWNEFPTVKSPKSYNSSIGLPLSLLQINDSHKLGIFEVGISEPSEMEKQENIFHP
QIGLLTHIGTAHLANFKSEEELIDEKIKLFKNSEVIIYNGNNPLVDKKIRELYSSKKLIS
YGFKDHNQVYYKNSISKNEDVVVQYLDEEISFPVHQKDEATLSNALALITVLKEFGIETQ
KIIEKINALKAVEMRLEAIEGIKDNIIINDSFNLDLDSLKTALQFLNEYNKPKKSLVLTD
IIGVNANSKELYEEVSDLVNEQKFDSVFLIGAEITQFSALFKSKTFTFIDTKELIESKHL
NEIKNQIILLKGARKFEIEKLKDILELRKHDTVLEINLNAILHNINYHKSLLRPSTKMMA
MVKANAYGLGSYEISEFLQHHHIDYLGVAFVDEGVELRKKGITVPIIVMNPEQHSYEAVI
EYNLEPEIYSFRVLELFYEALQKSGYDKKYPVHIKLETGMHRLGFKDHELNQLSNVLANK
NLKVQSIFSHLSSSDIPDEREFTLNQLKTFEKNSAYLIEKLGYTPIRHILNSSGITNYTD
HQQDMVRIGIGMLGESSDSEIQKQLRSVVSFKTVISQISVVENGESVGYSRRFKAEKPTK
IATIPVGYADGIPRLIGNQIGNVGISKTLAPIVGSVCMDMMMINVDHIPNVKEGDTVTIF
NAKPSLKEFASFCKTITYEVLTSISPRVKRIYIKD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaattatacagtagaagatatcgcaaaaatcaccaatgcaaaaatcattggtgataaa
gaattattaataaaaaatattgctttcgacagcagaacgatttattctactaagaatacc
gcttttattgctattaatacacacaaaaattcgggtgaaaaatttatagaatctgccatt
gacaagggaatcaatatcattatttctgaaaatcattattctcaatttgaagatatcaca
tggattattgttgaaaattctgtgatgtttcttcagaagttagcaaaatttcactttgaa
aattctcacataaaatcggtaggaattacaggaagcaacggaaaaacgattcttaaagaa
tggctgtatcaatgtctttggaatgaatttcctacagttaaaagcccaaaaagttataac
tcttcgattggtcttccgctttctcttctccagatcaatgattctcacaagctcggaatc
ttcgaagtaggaatttcggaaccgtctgaaatggaaaaacaggaaaatatttttcatccg
caaattggtttattaactcacattggaactgctcatcttgcaaattttaaatctgaagag
gaactgattgacgaaaaaatcaaactttttaaaaattcagaagtaattatttacaatggt
aataatccattggttgacaaaaagataagagaattatattcaagtaaaaaattaatttca
tacggttttaaagatcataatcaggtttactacaaaaacagtatttctaagaatgaagat
gttgttgtacagtatttagatgaagaaatttcatttccggtacatcaaaaagatgaagct
actttaagcaatgctctggctttaataacagtattaaaagagtttggaatagaaactcaa
aagatcattgaaaaaataaatgcattgaaggctgttgagatgagacttgaagccattgaa
ggaattaaagacaatataatcatcaatgactctttcaatcttgatcttgattcactgaaa
acggctctccagtttctgaatgaatataacaaacctaaaaaatctttggtcttaaccgat
attattggagtaaatgccaactcaaaggaactctatgaggaagtttcagatctggtgaac
gagcaaaaatttgattccgtttttttgattggtgccgaaataacacaattttctgcactt
tttaaatctaaaacttttacttttattgatactaaggaactaattgaaagtaaacatctt
aacgaaataaaaaatcaaattattttactgaaaggagccagaaaatttgaaattgaaaaa
cttaaagatattcttgaactgagaaagcatgacaccgttttggaaattaatctgaatgct
attctccataacattaattaccataaatctttgctgagaccatccacaaagatgatggca
atggtaaaggcaaatgcttacggactgggaagctatgagatttcagaattcttacagcat
catcatattgattatctgggagttgctttcgtagatgaaggagtggaactccggaaaaaa
ggaataactgtaccaattatcgtgatgaatcctgaacagcatagctatgaagcggtgatt
gagtataatcttgaacctgagatctatagtttcagagttttagaattgttttatgaagct
ttacagaaatcgggatatgataaaaaatatcctgttcacatcaagctggaaaccggcatg
caccgtcttggtttcaaagatcatgaactgaatcaactgagcaatgttttagccaataaa
aatctgaaagttcaaagtattttcagccatctttcgtcttcagatatacctgatgaaaga
gaatttactcttaatcagctaaaaacttttgaaaaaaattcagcttatttgatagaaaaa
ttggggtatactcctatcagacatatacttaattcatcaggaattacaaattataccgat
catcagcaagatatggtgagaattggtattggaatgcttggtgaatcttcagattctgaa
atacaaaaacaattacggtctgtcgtaagtttcaaaacagtcatttctcagatttctgtt
gtagaaaacggagaatcagtaggatacagcagaagatttaaagcagaaaagccgactaaa
attgctacaataccagtaggctatgcagacggaataccaagactcattgggaatcagata
ggaaatgtgggcatcagcaaaactttagctcctattgtaggaagtgtctgtatggatatg
atgatgattaatgtagatcatattcctaatgtaaaagaaggagatacagtgactattttc
aatgcaaaacccagtctaaaagaatttgcatccttttgcaaaacgataacttacgaagtt
ttaacatccatttcgccacgggtgaaaagaatttatataaaagattaa
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