Chryseobacterium taihuense: NCTC12078_02711
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Entry
NCTC12078_02711 CDS
T07055
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12078_02711 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctai03019
]
NCTC12078_02711 (groL)
03110 Chaperones and folding catalysts [BR:
ctai03110
]
NCTC12078_02711 (groL)
03029 Mitochondrial biogenesis [BR:
ctai03029
]
NCTC12078_02711 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctai04147
]
NCTC12078_02711 (groL)
Enzymes [BR:
ctai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NCTC12078_02711 (groL)
Messenger RNA biogenesis [BR:
ctai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NCTC12078_02711 (groL)
Chaperones and folding catalysts [BR:
ctai03110
]
Heat shock proteins
HSP60 / Chaperonin
NCTC12078_02711 (groL)
Mitochondrial biogenesis [BR:
ctai03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NCTC12078_02711 (groL)
Exosome [BR:
ctai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NCTC12078_02711 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NCTC12078_02711 (groL)
Exosomal proteins of breast cancer cells
NCTC12078_02711 (groL)
Exosomal proteins of colorectal cancer cells
NCTC12078_02711 (groL)
Exosomal proteins of bladder cancer cells
NCTC12078_02711 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
REF
Motif
Other DBs
NCBI-ProteinID:
VFB04675
UniProt:
A0A4U8WHV4
LinkDB
All DBs
Position
1:complement(2863606..2865231)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFDIESRDALKRGVDALANAVKVTLGPKGRNVVIEKSFGAPHVTKDGVSVAKEIE
LEDRVENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID
KAVATVVENLKAQSQEVGDSTDKVKQVASVSANNDETIGALIAEAFGKVGKEGVITVEEA
KGIDTTVDVVEGMQFDRGYQSPYFVTNPEKMLAELENPYILLVEKKISSMKELLPVLEPI
AQGGKSLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEEQGFTMENISLDMLGTAEKVSIDKDNTTIVNGGGEDSKIKGRVNQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAIASLESLSGANADENTGIKIVKRAIEEPLRQIVANAGGEGSVIVAKVAEGSGDFGYNA
KTDEYVNMLEAGIIDPTKVTRVALENAASVSGMLLTTECVITEVKKDEPAMPMGGGMPGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaattcgatatcgagtcaagagacgctttaaaaagaggtgttgat
gcattggcaaatgcagtaaaagtaactttaggtccaaaagggagaaacgtggtcatcgaa
aaatctttcggtgcgcctcacgttaccaaagacggagtttcggttgcaaaagaaatcgaa
cttgaagacagagtagaaaatatgggagcgcaaatggtaaaagaagtagcttccaaaacg
aatgatatcgcaggagacggtaccactaccgctactgttctggcacaggctatcgtaaga
gaaggtcttaagaacgtagctgcaggtgcaaacccaatggacttgaaaagagggatagac
aaagctgtagcaacagtggttgaaaacctaaaagctcagtctcaggaagttggtgattct
acagataaagtgaagcaggtagcttctgtttctgccaacaacgacgaaacgattggtgct
ttgatcgctgaagctttcggaaaagtaggtaaagaaggagttatcacggtagaagaagct
aaaggtattgatacaacggtagacgttgtagaagggatgcagtttgacagaggttaccaa
tcgccatatttcgtgacaaaccctgagaaaatgttagctgaactagaaaacccatatatc
cttttagtagagaaaaaaatctcttctatgaaagaattacttccggttcttgaaccaatc
gctcaaggtggtaaatctttattaatcatctctgaagaagttgaaggtgaagctttggca
actttagtagtaaacaaattgagaggttctctaaaaattgctgctgtaaaagctcctgga
tttggtgacagaagaaaagcaatgttggaagatatcgcgatcttaactggcggacaggtt
atttctgaagagcaaggtttcaccatggaaaacatctctttggatatgctgggaactgct
gaaaaagtatctatcgataaagataacacgaccatcgtaaacggtggcggtgaagacagc
aagatcaaaggtagagtcaaccagatcaaagctcagatggaaacaacaacttctgactac
gacagagaaaaattacaggaaagattggctaaattagccggtggtgttgctgtattgtac
gtaggtgcagcttctgaagttgaaatgaaagagaaaaaagacagagtagatgatgcactt
cacgcaacaagagctgctgtagaagaaggtatcgttgcaggaggtggtgttgctttggta
agagcgatcgcttctcttgaaagcctttcaggtgccaatgcagacgaaaatacaggtatc
aaaatcgtaaaaagagccattgaggagccattgagacaaatcgttgccaacgcaggtggt
gaaggctctgtaatcgttgctaaagtggctgaaggaagcggagatttcggttacaatgct
aaaactgatgagtatgtcaacatgcttgaagcaggtatcatcgaccctacgaaagtaaca
agagttgcccttgaaaacgcagcttctgtttcaggaatgcttcttacaactgaatgtgta
atcactgaagtgaaaaaagacgaaccagctatgccaatgggcggaggaatgccgggaatg
atgtaa
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