Chryseobacterium taihuense: NCTC12078_02906
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Entry
NCTC12078_02906 CDS
T07055
Symbol
vfr_2
Name
(GenBank) Cyclic AMP receptor-like protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
ctai
Chryseobacterium taihuense
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctai03000
]
NCTC12078_02906 (vfr_2)
Transcription factors [BR:
ctai03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NCTC12078_02906 (vfr_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
RepL
HTH_24
RPA_C
HTH_69
Sigma70_r4
HTH_11
DUF7343
HTH_29
P63C
HTH_Cmi2_C
HTH_6
HTH_CodY
Rrf2
MarR_2
GntR
TrmB
MarR
HTH_AsnC-type
EAP30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
VFB04858
UniProt:
A0A4U8WPE8
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All DBs
Position
1:3060938..3061588
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AA seq
216 aa
AA seq
DB search
MINNQFILNKFGSLGSDFLNELQKHAVISEIRAKTEIVREGQKNKFIPFLIKGSIKVYSL
NDGRELIYYYIRPNDSCLMTFSSIFSDYISRIYAVAEEDSEVLLLPVSIVHEWLIKFPQI
NRLFYGEYEKRFVDVMNMVNDAVFHKLDKRILNYIKQQISISGNNPVKLTHKEIANNLGT
SREVVSRVLKKVENEGEIIQTKEGIKVLINENARFS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaatcagtttattttaaataaatttggctctctgggtagtgattttttaaat
gaattgcaaaagcacgctgtaatttctgaaattagagcaaaaacagaaattgtacgggaa
gggcagaagaataaatttattccttttttaattaaaggctctattaaagtttattcttta
aatgatggtagagaacttatttactattacataagacccaatgacagttgtctcatgaca
ttttcgtcaattttttcagattatataagcagaatttatgcagttgctgaagaagattct
gaagttttgttgttacctgtttctatagttcatgagtggctgataaaatttccccaaatc
aacaggcttttttacggtgaatatgagaaacgttttgtcgatgtaatgaatatggtaaat
gatgcggttttccataagctggataaaagaattttgaattacattaaacagcagatttct
atcagcggaaacaatcctgtaaaacttacccacaaagaaattgccaataatctgggaact
tcaagagaagtggtgagcagagttttgaaaaaagtggaaaacgaaggtgaaattatccag
acaaaagaaggaataaaagttctcataaatgaaaatgctagatttagctaa
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