Chryseobacterium taihuense: NCTC12078_03121
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Entry
NCTC12078_03121 CDS
T07055
Name
(GenBank) conjugal transfer relaxase TraA
Organism
ctai
Chryseobacterium taihuense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
HTH_40
AAA_30
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
AAA_24
AAA_16
Viral_helicase1
AAA_5
Pif1_2B_dom
ATPase_2
NTPase_1
NACHT
Helicase_RecD
AAA_7
TsaE
AAA_18
SH3_13
RKP_N
FumaraseC_C
Sigma54_activat
cobW
DEAD
AAA_29
AAA
T2SSE
RsgA_GTPase
AAA_14
ATPase
Motif
Other DBs
NCBI-ProteinID:
VFB05067
UniProt:
A0A4U8WF30
LinkDB
All DBs
Position
1:3270276..3272405
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AA seq
709 aa
AA seq
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MNNHFFELIEFTSRSVFLTGKAGTGKTTFLNEFVKKTKKKHIVVAPTGIAAINAGGVTIH
SMFGLPLRTFLPTTDRIDSNIANNIVDLQQHFKYRKDKLKLLREVEVIIIDEVSMLRADV
LDMMDFSLRFIRRNSHRFGGVQMLFIGDLYQLPPVVRDEHVLKMYYNSPFFFDSVAIKEI
PLLTIELTKVYRQTDEHFLEILNAIRDGDVANIDFDELNKRYNPDFEAGDEPYVYLCSHN
KMADDINQEKLKEINLTPGIYEAKLFGEFKENQFPNDQFLELKVGAQIMFIRNDISGDKK
YYNGKLGEISALEENEIKVILEGSEREITVKREVWEQKKYSLDSDKMIREEVLGSFEQFP
IKLAWAVTIHKSQGLTFDKVIIDAGKSFTAGQVYVALSRCRTLEGIVLKSKITPEVIFKD
NRILKFQGDTHANDHVETILNQEKYDYAIRKLLRTLDCQWLMKEVEQWNNLSLVNKSIDR
VKANQLYLQLKHETQNLSKIFEKLERIIFQKISLFIQEKEEWSEIENKAKGAVNFFFSEI
NNKIFSPLKDFYAEIKGVKGLKQYNEEIRSWLEDIEDYLNGLKESYLLDIKLLEEKNNKE
VSMKIAKVPSQVLTFQLFEEGKTVSEIALERGLVKETVLGHLAKFAEQGLLDISRIITSD
KIKVFEKEFSQNSFESLNEWKNALPKDFEFNEIRILINHFTYHKTKHEA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcatttttttgaattaatagaatttaccagcagaagcgtttttcttaccgga
aaagcaggaactggtaaaaccacatttcttaatgagtttgtaaaaaaaacaaaaaaaaag
cacattgtggtagctcctaccggaattgctgctatcaatgcgggcggcgtaaccattcat
tcgatgtttggtcttccgttgcgtacttttttacccactacagaccgtatagacagtaat
atagccaataatattgttgatcttcagcagcattttaagtatcgtaaggataagctcaag
cttttgcgggaagttgaagtgattattattgatgaggtttctatgcttcgggcagatgtt
ttggatatgatggatttttctctaagatttatccgcagaaacagtcatcggtttggtggg
gttcagatgttgttcatcggagatttataccagcttccgcctgttgtgagagatgagcat
gtgcttaaaatgtattacaattctccttttttctttgatagtgttgccattaaagaaatt
cctctgcttacgattgagctgacgaaggtgtatcggcagactgatgagcattttcttgaa
attttaaatgcaattagagatggtgatgttgccaatattgattttgatgaattaaataaa
agatacaatccggactttgaagcgggtgatgaaccttatgtttacctttgttctcacaat
aaaatggcagatgatatcaatcaggaaaagctgaaagagatcaatctcacaccgggaatt
tacgaagctaagctttttggtgagtttaaagaaaatcagtttcccaatgatcagtttctt
gagctgaaagtcggagctcagattatgtttatccgcaatgatatttcaggcgataaaaaa
tactacaacggtaagctgggtgaaatttctgctttggaagaaaacgaaataaaagttatt
ctggaaggcagcgaaagagaaattaccgtaaagcgggaagtctgggaacagaaaaaatac
tctcttgattctgataaaatgatcagagaagaagttttgggtagttttgagcagtttccc
ataaaattggcttgggcagttacgattcataaaagccagggacttacctttgataaagtt
attatagatgccggaaaaagttttacggcaggacaggtgtatgttgctttgtcgcgctgc
agaactctggaagggattgttttaaaatcaaaaattactcctgaagttatttttaaagat
aacagaattttaaaatttcagggtgatacccatgccaatgatcatgtagaaacaatactg
aatcaggaaaaatacgattatgccatcagaaaacttcttcggacattggattgtcagtgg
ttgatgaaagaagtggagcagtggaacaatctgtctttggtaaataaaagtattgatcgg
gtaaaagccaatcagctttacctgcagcttaagcatgaaactcagaacctcagcaaaatt
tttgaaaaactggaacgaattatttttcagaaaatcagcctgtttattcaggaaaaagaa
gagtggtccgaaattgaaaataaagcgaaaggtgcggttaatttcttttttagtgaaatc
aataataagattttcagtccgctgaaggatttttatgctgaaattaaaggcgtaaaagga
cttaaacaatacaatgaagaaatcagaagctggcttgaagatattgaagattatctgaat
ggattaaaagagagctatcttttggatataaaacttcttgaagagaagaataataaagaa
gtaagcatgaaaatagctaaagttccttctcaggttcttacttttcaattatttgaagaa
ggaaaaacggtttctgaaattgccttagaaagaggtttggtaaaagagacggttctgggt
catctggctaaattcgcagaacagggcttgttggatatttccagaatcatcacttcagac
aaaattaaagttttcgaaaaagaattttctcaaaattcctttgaaagtctcaatgaatgg
aaaaatgctctgcccaaagattttgaatttaatgaaatcagaatactgatcaatcatttc
acttatcataagactaaacacgaagcctga
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