Chryseobacterium taihuense: NCTC12078_03202
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Entry
NCTC12078_03202 CDS
T07055
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12078_03202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_03202
DNA repair and recombination proteins [BR:
ctai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12078_03202
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12078_03202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Exu_RNase_H_like
GHL10
TSA
Motif
Other DBs
NCBI-ProteinID:
VFB05147
UniProt:
A0A4U8WFC0
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All DBs
Position
1:complement(3360747..3361433)
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AA seq
228 aa
AA seq
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MFSQKGYLLSFIKYGENDAVLHCFTEEEGFRSYFLKGIYSKKNKKKAFLLPLNQLNITVN
NNKDTGIKTISKFEMVQLNDIYTDIKANSVIFFVADFLNQILKNESKNEAIYQSIQELTD
QLERKNYRSHLIFLVKILTIQGVSPLLGEGKYLDPETGVFSASGTHHLFDAEVSLLWKII
LSASEPYEIVISKILRRNFLDSILVYYHYHFSDFRIPDSLEVLQQIFE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcaaaaagggtatttactttctttcatcaaatatggtgagaatgacgccgtt
ttgcactgctttaccgaagaagaaggttttcgaagctattttctgaaaggaatatacagt
aaaaaaaataagaagaaagcttttctgctcccgctgaaccaattgaatattacagtaaac
aataataaagataccggcattaaaaccatttctaaatttgaaatggtacaattaaatgat
atttatacggacataaaagccaattctgttatattttttgtcgccgattttctgaatcag
atactgaaaaatgaaagtaaaaatgaagccatttaccaatccatacaggaattgacagat
cagcttgaaagaaaaaactaccgttctcaccttatttttttggtgaaaatattaacaatt
cagggagtctctccgcttttgggtgaaggaaaatatcttgatcctgaaacaggtgtattc
tctgcttccggaacacatcatttatttgatgctgaagtttctttactatggaaaataatc
ctttcagcatccgaaccttacgaaattgtaatttccaaaattttaagaagaaacttttta
gacagtatacttgtgtattatcattatcatttttcagacttccgtattcccgactctctg
gaagtgcttcagcagatcttcgaatga
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