Chryseobacterium taihuense: NCTC12078_03340
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Entry
NCTC12078_03340 CDS
T07055
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctai
Chryseobacterium taihuense
Pathway
ctai03420
Nucleotide excision repair
ctai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12078_03340 (pcrA)
03430 Mismatch repair
NCTC12078_03340 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctai03400
]
NCTC12078_03340 (pcrA)
Enzymes [BR:
ctai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12078_03340 (pcrA)
DNA repair and recombination proteins [BR:
ctai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12078_03340 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC12078_03340 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
VFB05277
UniProt:
A0A4U8WFP3
LinkDB
All DBs
Position
1:3505770..3508100
Genome browser
AA seq
776 aa
AA seq
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MDYLNGLNESQYEAVTTLEGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFTN
KAAKEMKERIAKVVGQSNARSLWMGTFHSVFARILRSEAHYLGYPSNFTIYDQQDALNVI
KKVIKDLNIDADLYKPKKVQARISSYKNNLITVKAYYNNPELLEADEKANMKFLGKIYEK
YVEACFRNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSENEEGEKIKVYRSLSDADEANFVAGNIWEIHNRDQRKFGEFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIAYLRLLVNENDSEALMRIINYPA
RGIGETTQNKLIVFADSQNVSVSKVLSNLPMYAPHMGFNNGVITKLNDFWSMIKAFQVLL
KTETAYNVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LPNFLENIALSADTQKKDDADDAVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEVDEEYIEFLNPAMQG
RFINNSGITSNIFDEHPSEIRSFKKVEKKTITKADRDKPIAEPRKLKPVSTARIINPSGA
SSQDIEVGDKVRHDRFGVGEVAFLDGTDPQNIKAKVIFLHEGEKNLILKYAKLTKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaatggactgaatgaatcacaatatgaagctgttacaactctggaagga
cctttgatggtacttgcaggagccggttccgggaaaacgcgtgttcttaccatgcggatc
gctcatttgattaccaatggagtagatcctttcaatattctggcgcttacctttaccaac
aaggcggctaaagaaatgaaagaacgtattgcaaaagttgtaggacaaagcaatgcaaga
agcctgtggatgggaacttttcactccgtatttgcaagaattctgagaagtgaagcgcat
tatctggggtatccttccaatttcactatttatgatcagcaggatgcgctgaatgtgatt
aaaaaagtgattaaagacctgaatattgacgcagatttgtacaagccgaagaaagttcag
gcaagaatttcatcttataaaaataaccttattaccgtaaaggcttattataataatccg
gaactgctggaagctgacgagaaagccaatatgaagtttctcggtaagatttatgaaaaa
tatgtagaagcctgctttagaaacgggtcgatggattttgatgatttattgttaaaaacc
aatgaattgctgactagatttcctgaagttttggctaaatatcaggacaggttcagatac
attctggtggatgagtatcaggataccaatcattcacaatacctgattgtaaaagcttta
gcctcaaaatttgaaaatatttgtgtagtaggagacgatgcacagtcgatctattctttc
cgtggagcgaatatctataatattttaaattttaaaaaagattatcccgatgcagtaacg
gtttcactggagcagaactaccggtcgactcagaatatcgtgaatgcagccaatgtagtg
attgccaaaaaccttcagcagtttaagaaaaatgtttttagtgaaaacgaagaaggggaa
aaaataaaagtatatcgttcactttctgacgctgatgaggcgaactttgttgccggaaat
atctgggaaatacataacagggatcaaagaaaatttggggaatttgcaattttataccgt
accaactctcagacaagagcatttgaagatgctttaagaagaaaaaatattccctataaa
gtctatggaggtctctctttttatcaaaggaaagaggtaaaagatttaattgcctatctc
agacttttagtcaatgaaaatgactcggaagctttgatgagaatcatcaattatcctgca
agaggaattggcgaaactactcagaataaattgatcgtttttgcagattctcagaatgtt
tcggtatcaaaagttttaagtaatctgccgatgtatgcaccgcatatgggttttaataac
ggagtcattaccaagctgaatgatttctggtcaatgatcaaagcttttcaggttttgctt
aaaacagaaacggcatacaatgttgccatggaagtggctaaaagaagtggtctgattaaa
tttttaaaagacgaccagactcctgaagggatttcaagggtagaaaacgtacaggaattg
atgaactctatgcagggattcattgaggagcaaatgcagctggaagacggggatccgagt
ttacccaatttcctggaaaacattgcactttcggcagatacacaaaagaaagatgatgca
gatgatgctgtttctttaatgacgattcacctttccaaaggtttggagtttccggttgtg
catctggtaggtttagaggaaaatcttttcccgagctttatgagttctgcaacaagagag
gatctggaggaagaaagaagattgttttatgtagccctaaccagagctgaaaaacaggcg
tttttttcctatgctgtgtcgagatttcagtgggggaaaattaccgatgcagaaccgtca
agatttttaagtgaagtggatgaagaatatatcgaatttttaaatccggcgatgcagggc
agattcattaataattcaggtattacctccaatatttttgatgagcatccttcggaaatc
cgcagcttcaaaaaagttgagaaaaaaaccattactaaagcagatagagataaacctatt
gccgagccaagaaagctaaagccggtaagtactgccagaattatcaacccgagcggagct
tcttctcaggatattgaggtgggagataaagtaagacatgaccgtttcggcgttggtgaa
gttgcttttttagatggtacagatccacagaacataaaagcgaaagtgattttccttcac
gaaggcgaaaaaaatctgattctgaaatacgcaaaactgacgaaaatttaa
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