Chryseobacterium taklimakanense: 4412677_00079
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Entry
4412677_00079 CDS
T05512
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
Organism
ctak
Chryseobacterium taklimakanense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
SWI2_SNF2
SLFN-g3_helicase
Flavi_DEAD
GP24_25
Motif
Other DBs
NCBI-ProteinID:
SNV31933
UniProt:
A0A239WDE5
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All DBs
Position
1:85827..88724
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AA seq
965 aa
AA seq
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MNFTPYHAKFLSYELTRQLPANSLGKFTASLQDAQVDLNPHQVDAALFAFQSPLSQGAIL
ADEVGLGKTIEAGIILSQQWAERKRRLLIITPANLRKQWNQELADKFFLPSIILESKSFN
YEIRKGNLNPFSRHDEIVICSYPFAKTKAPYIEQTKWDLIIIDEAHRLRNVYKPSNKISN
AIKDATRNYKKVLLTATPLQNSILELYGLVSIIDDYVFGDIKSFKSQYSRNLEEEDYLEL
RNRIQPVIHRTLRRQVLEYINYTDRIAIVEEFIPTDEETELYVGVSLYLQRDKLYALPNS
QRQLMTLILRKLLASSSYAIYGTLDTLVKKLEAILKKQEGTDLLDELDEDYETADEVADE
WFEEDESEEDELFYSEEDLENIKAEIEDLKKFRSLAYTIRKNSKAEHLFVALEKGFAELA
RLGANKKALIFTESRRTQEYLYNTLEARGYKDKVMLFNGMNNDRKSKEIYKNWLKENKGT
DKITGSVTADKRAALVDYFKNEATIMIATEAAAEGINLQFCSLIVNYDLPWNPQRIEQRI
GRCHRYGQKHDVVVINFLNKKNAADVRVYELLDEKFQLFNGVFGASDEVLGAIGNGVDFE
KRIAQIYQDCRSPEEIQSAFDSLRDELKPEIDERMKSVKSTLLENFDDEVREKLRTNQDE
TLRFLSRFEDNLWKVTQFFLKDFANFNSDYSFSLNRNPFPGEEIHSGPYMILKSSEGKKK
SSIEVPDDTNIYRVGHKLAQRILDTCKQNTTEEKEIIFDYTASQNKIAYLEKFIGQTGVM
QVSSLSIHSFDQEDYLLVACYTEEGEVLDSEMAARLFSLQGSEGNFVAIDEEYKKTLSEI
IFAEKQKIISENAERNRDFFDTEMDKLDQWADDMKISLEKEIKDLDAEIRLKKSEAKKIL
NLENKVAAQREIKDLEKKRNEKRQVLFSAQDEIDERKDNLLNDIESRLNQKIEEKELFTI
NWKLI
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaactttacgccttaccacgctaaatttttatcttacgaattaacaagacaacttccg
gctaatagtttagggaagtttaccgcatccttacaggacgcacaggtagatttaaaccca
catcaggttgatgctgcactgtttgcttttcagtcgccattatcgcagggggcaatcttg
gcagatgaagtaggactcggaaaaacaattgaagcgggtattattttgtcacaacaatgg
gcggaaagaaaaagaagattactcattattacacctgccaatttgcgtaagcaatggaac
caggaacttgcggataagttttttttaccgtcaataattttagaatccaaatcttttaat
tacgaaatcaggaaaggaaatcttaatcctttcagccgccacgatgaaatcgttatttgt
tcatatcctttcgccaaaactaaagcaccatacattgaacaaaccaaatgggacttaatt
ataatcgatgaagcacaccgtttacggaatgtctataaaccttccaacaagataagtaac
gcaattaaagatgcaacccgtaattataagaaagttttactcaccgctacgcctttacaa
aattctattcttgaattatatggactggttagcataatcgacgactatgttttcggagat
attaaaagttttaaatcacaatacagcagaaaccttgaagaagaagattatctggaatta
aggaacagaattcagcctgttattcacagaacacttcgcagacaggttttggagtatatc
aactatacagacagaatcgccattgtagaagaatttatccctactgacgaagaaaccgag
ttgtatgttggtgtttctctttacctgcagagagataaactgtatgccttgccgaacagc
caaagacagttaatgactttgattctgcgaaaattgctcgcttcatcctcttatgctatt
tatggcactttagatacattagttaagaaactggaagccattttaaaaaaacaggaagga
accgacttgcttgatgaacttgatgaagattatgaaaccgcagatgaagtggcagacgaa
tggtttgaagaagatgaatcagaggaagatgaattgttttactctgaagaagatttagaa
aatattaaggcagaaattgaagacctcaagaagttcaggtctttagcatataccataagg
aaaaactcaaaagccgaacatctttttgtggctttggaaaaaggttttgcagaacttgca
agattaggagccaataaaaaggcattaatctttacggaaagtcgaagaacgcaggaatat
ttatataataccttggaagcacgcggatataaagataaagtgatgctttttaacgggatg
aataacgaccgtaaatccaaagaaatttacaaaaactggcttaaagaaaataaaggaact
gataaaattacgggctcggtaaccgcagataaaagagcagcattggtagattatttcaaa
aatgaagcaacaattatgattgctactgaagccgcagccgaaggtattaacctgcagttt
tgctctttgattgtgaattatgatctgccttggaacccgcagagaattgaacagagaatt
ggacgctgccacagatatggccagaagcacgatgtagttgttatcaacttccttaacaaa
aaaaatgcagcggatgtaagggtttacgaattacttgacgaaaaattccaactgtttaac
ggtgtttttggggcaagtgatgaagtgttgggtgcaattggcaacggtgttgattttgaa
aagagaattgcacagatttatcaggactgcagatcacccgaggaaatacagtccgctttt
gattctttacgggatgaattgaaacctgaaattgatgaacggatgaagtccgtgaaatca
acattattggaaaattttgatgatgaagtgcgcgaaaaattaagaaccaatcaggacgaa
acgcttcggttcctgtcccgatttgaagacaatctctggaaggtgacacagtttttcctc
aaagattttgcaaatttcaattcagattacagttttagtttaaaccgcaatccgtttcct
ggagaagaaattcattccggaccgtatatgattttgaaaagttccgagggcaaaaagaag
tcttcaattgaggttccggatgatacaaatatctatcgtgttgggcacaaattagcacag
cggattctggacacctgcaaacagaacacaacagaagaaaaagaaataattttcgattat
actgcatcacaaaacaaaattgcatacttagaaaagtttattgggcaaaccggtgtgatg
caggtcagcagtctttcgattcattcattcgatcaggaggattatctgttggttgcctgt
tataccgaggagggcgaagtgttggattctgaaatggcagcacgcttattctcacttcag
ggttctgaaggaaattttgttgcaatagatgaggaatataagaagacgctttctgaaatc
atttttgctgaaaaacaaaaaatcatcagtgaaaatgcagaacgcaacagggatttcttt
gatacagaaatggataaactggatcagtgggcagatgatatgaaaatcagtctggagaaa
gaaattaaagatctggatgccgaaatccgactgaaaaaatctgaagccaaaaaaattctt
aacctagaaaacaaagttgcagcacaacgcgaaataaaggatttagaaaagaaaagaaat
gaaaaaagacaagtcctgttttcagcccaagatgaaatagacgagcgtaaggataattta
ttgaatgacattgaatcccgcttaaatcaaaaaattgaagaaaaagaattgtttaccatt
aattggaagttgatataa
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