Chryseobacterium taklimakanense: 4412677_00274
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Entry
4412677_00274 CDS
T05512
Symbol
uvrA_1
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4412677_00274 (uvrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctak03400
]
4412677_00274 (uvrA_1)
DNA repair and recombination proteins [BR:
ctak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412677_00274 (uvrA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
4412677_00274 (uvrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_21
AAA_25
nSTAND3
ATPase_2
AAA_15
Motif
Other DBs
NCBI-ProteinID:
SNV34148
UniProt:
A0A239WJU7
LinkDB
All DBs
Position
1:283513..286341
Genome browser
AA seq
942 aa
AA seq
DB search
MHSEKEYIEIYGAREHNLKNIDVRIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVS
DAYSLSSGRKLVSYTEDQILDAIKENYKGEKIMLLAPVVRSRKGHYHELFVQMAKKGYGQ
ARIDGELQDIEYDLKLDRYKTHDIDIVIDRWIIGESATENRMEKSLRTAMEMGEGIIGIQ
KLGSTDIEYFSKNLMDDETGHSLAMPEPNTFSFNSPKGSCPNCKGLGTIKKVNADYFVEN
PKLSINQGALLPLEDIKSNKWILGQIKNILEVFDKDLSTPFKEIPKEALELMYYGAHKDV
SKELKHAGITKKIKVNFEGLVPTIEEMIEDKESYDAVLLERHFTTEETCPECKGTRLQPT
SLSFKIDGKNIAEVNALSLADLKEWLHQVRPKFSEKNKIIADEILKEIETRLQFLLDVGL
DYLSLSRSSRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKNLR
DIGNSVLVVEHDKDMIMEADEILDIGPRAGKFGGEILWQGKPEDLKKAKTITADYISGKR
KIEIPEQRRVGNGKSIVLKGASGNNLKNVNLTIPLGKLVVVTGISGSGKSSLINGTLYPV
LNRHFYRAVQEPLPYKSIEGLDNIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFAEL
PESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEAVEFFAPIPKIFNKVKTLQDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRQTGNTLYILDEPTTGLHFEDVKILMDAINKLVDLGNSFIIIEHNMDVIKLA
DYIIDVGPEGGKHGGTIVAEGTPEQIIKSKKSLTGKFLKKEM
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcactcagaaaaagaatatatagaaatttacggggcccgtgagcacaaccttaaaaat
attgatgtcaggattccgcgcaacgaacttgttgtaattaccggactttccggttcaggg
aaatcttcgctggcttttgataccattttcgctgaaggtcaaagacgttacatcgaaact
ttttccgcctacgcgaggcaatttcttgggggactggagagacctgatgtcgacaagatt
gaaggcctttctcccgtaatcgccatcgaacagaaaaccacaaataaaaatccgcggtct
acggtaggaacggtgacagaactttacgatttcctgcgcctgctctttgcgagggtttcc
gatgcttactcactttcctcaggcagaaaactggtcagctataccgaagaccagattctg
gatgccatcaaggaaaattacaaaggggaaaaaattatgcttttagcaccggtggtgcgc
tccagaaaaggacattaccacgaacttttcgtgcagatggcgaagaaaggatacgggcag
gcgagaattgacggcgaacttcaggacatcgaatacgatctgaaactcgaccggtacaaa
acccacgatatcgatatcgttatcgaccgctggattatcggcgaaagcgccacagaaaac
cgcatggagaaatcactccgtacagcgatggaaatgggtgagggaattataggaattcaa
aaactgggcagtacggatattgaatatttttcaaaaaacctgatggacgatgaaaccggc
cattctttggccatgccggaaccgaacacattctctttcaattcaccaaaaggcagctgt
ccgaactgcaaaggactcggaaccatcaaaaaagtgaatgccgattattttgtagaaaat
ccgaagctgtcgatcaaccagggcgctcttttgccgttggaagacataaaatctaacaaa
tggattttaggacaaatcaaaaatattctcgaagttttcgataaggatctttcaacgccg
tttaaggaaattccgaaggaagcgctggaactgatgtattacggcgctcacaaagacgtc
agcaaagaactgaagcacgccggaattaccaaaaaaatcaaagtgaattttgaaggtctg
gttcccacgatcgaagaaatgatcgaggataaggaaagttacgacgcagttttgctggaa
aggcattttaccaccgaagaaacctgccctgaatgtaagggaacccgcctgcaacccaca
agtttatcctttaaaattgacggaaaaaatattgcggaagtcaatgcgctgagtttggcc
gatttaaaagaatggcttcatcaggtcaggccgaaattttctgaaaaaaataaaattatt
gccgatgagatcttgaaagaaatcgaaacacggcttcagtttctgcttgatgtgggtttg
gattatctaagtttgagccgcagttccagaacgctttccggtggtgagtctcaaaggatc
cggcttgcgacgcaaatcggttcgcagttggtaaatgtgctttatattctggatgaacct
tcaatcggccttcaccagagagacaatgaaagactgatcaattctttgaagaatttgcgt
gacattggaaattccgtccttgttgttgagcacgacaaagacatgattatggaagccgac
gaaattctggatatcggtccgcgtgcgggaaaatttgggggcgaaattctttggcaggga
aagcctgaagatctaaaaaaagcaaaaaccattaccgcagattatatttccggaaaacgg
aaaattgaaattcctgaacaaagaagggtaggaaacggaaagtccatcgttttaaaaggt
gcttccggaaacaatttaaaaaatgtaaatctcacaattccgctgggtaaacttgttgtg
gtgacaggaatttcaggaagcggaaaatcttcgctcatcaacggaacgctttacccggtt
ctgaaccggcatttttaccgcgctgtacaggaacctttgccttataaaagcattgaaggc
cttgataatatcgataaaattgtggatgtggatcaaacgccgatcggcagaacgccgcgt
tccaatccggcaacttataccggaatgttcaccgatatccgaaatctctttgccgaactt
cccgaatccaaaatccgtggctataaagcggggagattttcctttaacgtaaaaggcgga
cgctgcgaaacttgccagggcgggggtttgaaggtcattgaaatgaattttctccctgat
gtttacgtgcactgtgaaacctgcaacggaaagcgcttcaaccgcgaaactttggaggta
cgttacaaaggaaaatccatttccgatgttctggaaatgacgatcgatgaagcagtggaa
ttttttgcaccgattcccaaaatttttaataaagtaaaaactttgcaggacgttggtttg
ggctatatcactttaggccagcaatccacaactttgagtggtggcgaagcgcagcgcatc
aaactggcgaccgaactttccaaacgccaaactgggaatacgctttacattctggatgaa
cctacaacaggactgcatttcgaagacgtgaaaattttgatggacgcgatcaacaaactg
gtagatttaggcaattctttcatcattattgaacacaatatggatgtgattaaattggcc
gattatatcattgatgttggtcctgaaggcggaaaacacggtggaaccatcgttgcagaa
ggtacaccggaacagatcattaaatccaaaaaatctttgacgggtaagtttttaaagaag
gaaatgtag
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