Chryseobacterium taklimakanense: 4412677_00440
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Entry
4412677_00440 CDS
T05512
Symbol
ffh
Name
(GenBank) Fifty-four homolog
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak02024
Quorum sensing
ctak03060
Protein export
ctak03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
4412677_00440 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
4412677_00440 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
4412677_00440 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ctak02044
]
4412677_00440 (ffh)
Enzymes [BR:
ctak01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
4412677_00440 (ffh)
Secretion system [BR:
ctak02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
4412677_00440 (ffh)
Eukaryotic Sec-SRP protein
4412677_00440 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
CbiA
AAA_22
ATPase
CLP1_P
nSTAND3
APS_kinase
KAP_NTPase
AAA_30
AAA_18
AAA_16
SLFN-g3_helicase
AAA_31
AAA_33
ResIII
6PF2K
AAA_24
ATP_bind_1
AAA_19
DO-GTPase1
ArsA_ATPase
NACHT
DUF2780
MMR_HSR1
AAA_14
NPHP3_N
RRM_Nup35
KTI12
TsaE
AAA
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
SNV35625
UniProt:
A0A239WLU8
LinkDB
All DBs
Position
1:437449..438822
Genome browser
AA seq
457 aa
AA seq
DB search
MFNSLQEKLDKALHNIAGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GQNVLTSLTPGQLMTKIVHDELVDLMGGSQEGINLSGKPTVILIAGLQGSGKTTFSGKLA
NYLKTKRGKKPLLVACDVYRPAAIEQLKVLGSQVNVPVYTEEGATNPSAIAENAVKFATQ
NNHDVVIVDTAGRLAIDEQMMNEIRSVHYFIKPQETLFVVDSMTGQDAVNTAKAFNDALN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVDINDDAFKHIEAIIHSMTPEERRKPSLIDMSRKKRIARGSGRKLEDVNQLMKQFDQMG
KMMKMMQGPQGRQMMQMMQKMGGPGGMPGMGGNLFGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagtttacaggaaaaactagataaagcattacacaatattgccggccgcggc
aaaattaccgagatcaacgtagcagaaaccgtgaaggaaatccgccgtgccttggttgat
gccgacgtgaattacaaggttgccaaagacctcaccaaacgcgttcaggacaaagctttg
ggacagaacgttcttaccagtttaacgccgggccagctgatgaccaaaatcgttcatgat
gaattggttgacctgatgggcggctcgcaggaaggcatcaacctttccgggaaaccaacg
gtcattcttatcgccggtttgcagggttcaggtaaaacaaccttctccggtaagcttgcg
aactatttaaagacaaaaagaggcaaaaaacccttacttgttgcctgcgacgtttacagg
ccagctgcaatcgagcagctgaaagttctcggaagccaagtgaatgttcctgtttatacc
gaagaaggcgccaccaatccttctgcgattgcagaaaatgctgtgaaattcgcgacacaa
aacaatcacgatgtcgtaattgtagataccgccggccgtttggcaattgatgagcagatg
atgaacgagatcagatccgtgcattatttcatcaagccgcaggaaacgcttttcgtagtg
gattccatgaccggtcaggacgccgtgaacaccgctaaagccttcaatgatgcactaaat
tttgacggcgttgtacttacaaaattagacggtgatacccgtggtggtgccgcactaacc
atccgttccgtagtggaaaaaccgattaaatttatttccacaggagaaaaaatggaagcg
ctcgacctgttctatccggaaaggatggccgacagaattctggggatgggtgacgtagtt
tcccttgttgaaagagcccaggagcagtttgatgaagaagaagcaaaaaaactccacaag
aaaattgctaaaaacgaattcggctttgatgatttcctaaagcagatcaaccagatcaaa
aaaatgggaaatatgaaagatctcatgggcatgattcctggagtcggaaaagcaattaaa
gatgtagacatcaatgatgacgcattcaaacatatcgaagccatcatccactccatgacg
ccggaagagcgaagaaagccatccctcatcgatatgagccgcaagaaaagaatcgcaaga
ggttccggaagaaaacttgaagatgtaaatcagttgatgaagcagtttgaccaaatgggt
aaaatgatgaaaatgatgcaggggccacaaggcagacaaatgatgcagatgatgcagaaa
atgggcggacctggcggaatgccgggaatgggcggcaatcttttcggaagatga
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