Chryseobacterium taklimakanense: 4412677_00748
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Entry
4412677_00748 CDS
T05512
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ctak
Chryseobacterium taklimakanense
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctak03032
]
4412677_00748
03400 DNA repair and recombination proteins [BR:
ctak03400
]
4412677_00748
Enzymes [BR:
ctak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
4412677_00748
DNA replication proteins [BR:
ctak03032
]
Prokaryotic type
DNA Topoisomerases
4412677_00748
DNA repair and recombination proteins [BR:
ctak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
4412677_00748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
SNV38123
UniProt:
A0A239WVZ4
LinkDB
All DBs
Position
1:751030..752133
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AA seq
367 aa
AA seq
DB search
MQDTPLDIVNALKPSKILKIMKDPVKSANAVELVYTNDQSAEGITRKKYGKKFHYYLDGV
RINDQQEIARINKLAIPPAWEQVWICALNNGHLQATGIDARQRKQYRYHPVWNALRNHTK
FYRMLQFGYTLPKIRLQIEQDLSLGKLEQRKVLAVIVSLMERTNIRIGNNVYEKLYGSFG
LTTLKDKHIDVKGDKIKFSFKGKKGIYHDIDLKNRRLAKAVQNCKDIPGKELFQYYDEDG
KRHAVDSGMVNSYIKEISGDDFTAKDFRTWSGTVNALIAFKEIGLAENNKEYKSKVKEAL
EKVAENLGNTATVCRKYYVHPLVINLYENSSIEKYLDELDKIEVDDGKSGLTKEEQIVMK
ILENEKL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacgcccttagacatcgtaaacgcgctgaaaccttcgaaaatccttaaaata
atgaaggatccggtgaaatctgcaaacgccgtcgaactggtttataccaatgaccagagt
gcggaaggcattaccaggaaaaaatatggtaagaaattccactattaccttgatggtgtg
cggattaatgatcagcaagaaatcgccagaattaacaaactcgccattccgccggcttgg
gaacaggtatggatctgcgctttgaataacggacatcttcaggcgaccggaatcgatgcg
agacagcgcaaacagtaccgctaccatccagtttggaacgctttgcgcaaccataccaaa
ttttacaggatgctgcaatttggctatactttgccgaaaatacgccttcagattgaacag
gatctgtcgctcgggaaactggagcaaagaaaagtactggccgttattgtaagtttgatg
gagcgcaccaacatcagaatcggaaacaacgtttacgaaaaactttacggctcatttgga
cttaccacactgaaagacaaacatatcgatgtaaagggcgataagattaagttttcattc
aaaggtaaaaaaggaatttaccacgatatcgatttgaaaaaccgaagactcgcaaaagcc
gtccagaactgcaaagacattcccggcaaagaacttttccagtactacgacgaagacggt
aaacgccacgccgtggacagcggaatggtgaattcctacattaaggaaatcagcggtgac
gactttacggcaaaggatttccggacgtggagcggaactgtgaatgctttgattgctttc
aaagaaatcggcctcgcagaaaacaataaggagtacaaatcaaaagtaaaggaagcgctt
gaaaaagtggccgaaaacctcggaaatacggctacggtttgcagaaaatactacgtgcat
cctttagtcatcaatctttacgaaaactcttccattgaaaaatatctggatgaactcgat
aaaattgaagtagatgacggcaaatcgggattgacaaaagaagagcaaattgtaatgaaa
attctggaaaacgaaaagctttag
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