Chryseobacterium taklimakanense: 4412677_01265
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Entry
4412677_01265 CDS
T05512
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ctak
Chryseobacterium taklimakanense
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctak03009
]
4412677_01265 (rlmCD)
Enzymes [BR:
ctak01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
4412677_01265 (rlmCD)
Ribosome biogenesis [BR:
ctak03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
4412677_01265 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Methyltransf_15
N6_N4_Mtase
RrnaAD
Methyltransf_4
FtsJ
PCMT
PrmA
2-ph_phosp
NpmA
Motif
Other DBs
NCBI-ProteinID:
SNV43495
UniProt:
A0A239X9W0
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All DBs
Position
1:complement(1311122..1312531)
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AA seq
469 aa
AA seq
DB search
MSKRRRNLILENIKLTSAGAKGVAVGKTEEGKTVLVSGAVPGDVVNARVKKAKSKYFEAE
AVEILERSPYRVEPKCIHFGVCGGCKWQNLSYEKQLDFKESEVVNNIRRIGGVDGFETLP
ILGSDEQYFYRNKMEFSFSDSRWLTLDEVNSTENIDDKNALGFHIPGMWSKILDLKECWL
QEDPSNEIRLAVKQYAEENNLEFFDVKNQEGFLRTLMMRQTSQGEWMVLFQLFREEKENR
EKLFDFLLLKFPQIKTLVYAINPKQNDSIYDLEVQTYFGEGFLMEEMDGLKFKIGPKSFF
QTNYKQALNLYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARNAKQVIGIESVQEAIDAA
TEHAKLNGLTNCTFYCGDMKEVFTEEFLESHPKADVLITDPPRDGMHQKVVDQILTLAPE
RIVYVSCNSATQARDLALMKDMYRVVKILPVDMFPQTHHVENIALLELI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagaagaagaaatctcattcttgaaaatataaaactcacttctgcgggcgcg
aaaggtgttgcagtgggaaaaactgaagaaggaaaaaccgttctggtttccggagccgtg
ccgggcgatgtggtgaatgcacgggttaagaaagcaaaatcaaaatattttgaagctgaa
gccgtagaaattttagaaagatcgccttatagagttgagccaaaatgcatccactttgga
gtctgcggcggttgcaaatggcagaatctttcttatgaaaaacagcttgatttcaaggaa
agtgaagtggtgaacaatatccgcagaataggtggtgttgacggttttgaaacattgccg
attctgggttcagacgagcagtatttttacaggaataagatggaattctctttttcagat
tcacgatggctgactttggatgaagtaaattctacagaaaatattgatgataaaaatgcc
cttgggttccatattcccggcatgtggagtaaaattttagatttaaaggaatgctggttg
caggaggatccgtccaacgaaatccgcctcgctgtaaaacagtatgctgaagaaaataac
ctcgagtttttcgatgttaaaaatcaggaaggttttttgaggactctgatgatgcgccaa
acgtcacaaggcgagtggatggtgcttttccagctgttccgggaagaaaaggaaaaccgc
gagaaactttttgattttctgcttcttaagttcccgcagatcaagacattagtgtatgcc
atcaatccaaaacagaacgattctatctacgatctggaggtgcagacctattttggcgaa
ggcttcttaatggaagagatggatggcttgaaatttaaaatcggcccaaaatcattcttt
cagaccaactataaacaggcgctcaatctttaccgcaaaaccctcgaatttgctgatctt
aaaggtgatgaagtggtttacgacctttacaccggaactggaaccattgctcagtatgtt
gccagaaatgcaaaacaggtcatcggaatcgaatctgtgcaggaagcgattgatgcagcc
actgaacatgccaaactcaacgggctaaccaactgtacgttctattgcggcgatatgaag
gaagttttcacggaagaattccttgaaagccatccaaaagctgatgtactgatcaccgat
cccccaagagacggaatgcaccagaaagtagtagatcaaatcctgacacttgccccggaa
agaatcgtttatgtaagctgtaattcagccacacaggcgcgcgacttggctttgatgaaa
gatatgtaccgcgtggtgaaaatccttccggttgatatgtttccgcaaacgcatcacgtg
gaaaacatcgcacttttggagctgatataa
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