Chryseobacterium taklimakanense: 4412677_02450
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Entry
4412677_02450 CDS
T05512
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak03420
Nucleotide excision repair
ctak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4412677_02450 (pcrA)
03430 Mismatch repair
4412677_02450 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctak03400
]
4412677_02450 (pcrA)
Enzymes [BR:
ctak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4412677_02450 (pcrA)
DNA repair and recombination proteins [BR:
ctak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412677_02450 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
4412677_02450 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
SNV50673
UniProt:
A0A239XX80
LinkDB
All DBs
Position
1:2511002..2513338
Genome browser
AA seq
778 aa
AA seq
DB search
MDYLKGLNDAQHEAVTTIEGPLMVLAGAGSGKTRVLTMRIAHLITNGVSPFNILALTFTN
KAAREMKDRIAKVVGDSDAKSIWMGTFHSVFARILRSEAHYLGFPSNFTIYDTQDALNVM
KKVLKELNIDADLYKPKKVLARISAYKNNLITVKAYMNNPELLEADERANMKHLGVIYAK
YVDACFRNGAMDFDDLLLRTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAVTVSLEQNYRSTQNIVDAANAV
ISRNVQQFKKNVFSDNEIGEKIKVYRALSDADEAGFVAGNIWEQHNSQQRKFSDFAILYR
TNAQTRAFEDALRKKNIPYRVYGGLSFYQRKEVKDLVAYLRLLVNENDNEALTRIINYPT
RGIGETTQNKLIVFADSQGISVSKVLDNLGFYAPQLGLNNGVLTKLADFWAMIKAFEVML
KTDDAYTVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELLNSMRGFIDEQQQLEDGDPS
LSNFLGNIALSTDQDNNKDDDQEKVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSSTR
EELEEERRLFYVALTRTEKQAFFTYAVSRFQWGKITDAEPSRFLSEVNSEYIELINPATE
SRFVNHSGLKSNIFDDEPSVPKSFRKLDPKKKISKASDALSLPQSKNLKPVSTAKIINPS
GASSQDIEVGDKVRHDRFGIGEVVFLDGTDPQNIKAKVIFQNEGEKNLILKFAKLVKI
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaatgatgcacaacacgaagcagtaaccacgatcgaagga
ccgctgatggttctggcaggcgctggttccggcaagacgcgcgtgctcaccatgaggatt
gcccaccttattaccaacggggtgagccctttcaatattctggctttgacctttaccaac
aaagctgcccgtgaaatgaaagaccgtatcgcgaaagtcgtcggcgacagtgatgcgaaa
agcatttggatgggaacgttccactccgtttttgccagaattttgaggagtgaagcgcat
tatctgggttttccttcgaatttcacgatttatgatacacaggatgcactgaatgtgatg
aaaaaagtgctgaaggaactcaatatagatgcagatttgtacaagcctaaaaaggtcctg
gcaaggatttctgcctacaaaaacaatctcatcaccgtaaaggcatacatgaacaatccc
gaacttctggaagcggatgaacgggcaaacatgaaacatctgggagtcatttatgccaaa
tatgttgatgcctgtttccggaatggcgcaatggattttgacgatttgttattgagaacc
aatgaactcttgacaaggttcccagaggtactggcgaaatatcaggacaggttccgctat
attttggtggatgagtatcaagatacgaatcattctcagtacctgatagtaaaggcatta
gcgtcaaaatttgaaaatatttgtgtggtgggtgacgacgcccagtcgatctactccttc
cgtggcgccaacatttataatattttaaatttcaaaaaagattatcccgacgctgtgacg
gtttccctggagcagaattaccgctctacccaaaacatcgtggatgctgccaatgccgtg
atttccagaaacgtgcagcagttcaagaagaacgttttcagtgataacgaaatcggggag
aaaataaaggtttaccgcgcgctttctgatgccgacgaagccggattcgtagccggaaat
atctgggagcagcacaattctcaacagagaaaattcagcgattttgccattctttacaga
accaatgcgcagaccagagcctttgaagacgctttaagaaagaaaaatattccctaccgt
gtttacgggggcttatccttttaccaaaggaaagaggtgaaagatttggttgcttacctg
cggcttttggtaaacgaaaacgataatgaagcgctcacccgaatcatcaattatccaaca
cgcggaattggtgagacaacacagaacaaacttatcgtttttgcggacagtcagggaatt
tcggtgtcaaaagttcttgataatctgggattttatgcgccgcagttgggtttaaataat
ggagttttaaccaaactggctgatttctgggcgatgattaaagcctttgaagtgatgctg
aaaaccgatgacgcctataccgttgcgatggaagttgccaaacgttcgggactgatcaaa
tttctgaaagacgaccagacaccggaaggcatttcccgagtagaaaacgtgcaggaactc
ctgaactcaatgcgcggattcatcgatgagcagcagcaactggaagacggtgacccaagc
ctgagcaatttcctcggaaacattgcactttccacggatcaggacaacaataaggatgat
gatcaggagaaagtttcgctgatgaccattcacctttccaaaggcctggaattccctgta
gtgcatctggtggggcttgaggagaacctgttcccaagtttcatgagttcgtcgacccgt
gaagaactggaagaagagcggcgtttgttctacgtagcgcttaccagaaccgaaaaacag
gcgttttttacttacgcggtttcccgtttccaatgggggaaaattaccgatgcagaacct
tcaagattcctgagcgaagtcaacagtgaatatatagaattgatcaatccggcaacagaa
agccgtttcgtaaatcattcaggtttaaaatcgaatatttttgatgatgaaccttcagta
ccgaaatctttccgcaaacttgatccgaaaaagaaaatttccaaagcttctgatgctttg
tctctgcctcagtctaaaaatttaaaaccggtttccacagctaaaatcattaatccaagc
ggcgcaagttcacaggatattgaagtcggcgacaaagtgagacacgaccggttcggaatt
ggagaagtagtttttctggacggcaccgatcctcaaaacattaaagcaaaagtcatcttc
cagaacgaaggggagaaaaatctgattcttaagtttgcgaagctggtgaagatttga
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