Chryseobacterium taklimakanense: 4412677_02453
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Entry
4412677_02453 CDS
T05512
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak03030
DNA replication
ctak03410
Base excision repair
ctak03420
Nucleotide excision repair
ctak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4412677_02453 (polA)
03410 Base excision repair
4412677_02453 (polA)
03420 Nucleotide excision repair
4412677_02453 (polA)
03440 Homologous recombination
4412677_02453 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctak03032
]
4412677_02453 (polA)
03400 DNA repair and recombination proteins [BR:
ctak03400
]
4412677_02453 (polA)
Enzymes [BR:
ctak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4412677_02453 (polA)
DNA replication proteins [BR:
ctak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
4412677_02453 (polA)
DNA repair and recombination proteins [BR:
ctak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
4412677_02453 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4412677_02453 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DUF2202
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
SNV50681
UniProt:
A0A239XUS0
LinkDB
All DBs
Position
1:2514691..2517639
Genome browser
AA seq
982 aa
AA seq
DB search
MVMIIKNEKSPSSHFPAQNLHFSSAHLPAKKTIFVLMSHNNDKRLFLIDAYAMIFRGYYA
LIRNPRLTSKGLDTSAIFGFTNSLIELIRRERPSHLAVVFDVGRTNVRTNDFADYKANRG
ETPEAIQAAIPYIHRILEAMHIPILGVEGYEADDVIATIACKAEPVGYKIFMVTPDKDFG
QLVTENIKIYKPGLKGGDVEILGVDEIKAKYQIEDPKQVIDFLAMMGDSIDNIPGLDGVG
EKTAMKFLNEYGSIENLLANTHQLKGKLKEKVEASAERGLLSKKLATIICDVPIEFEEEY
YNLDEPDFEKVREVFDEIEFRRLYENLYRAFKPEGMEHAVTDPGKISRYDKVNLSKDASE
TVQLDLFANFEELEQGTSSKNTIAENDHLYQLIDNPMAQRMLVNNLMKQRAVCFDTETTS
LNEMEAELVGMSFSYKKGLAYYVPLSEKRDEARQTLEIFKPFFEKEDVLKIAHNLKFDYK
ILKLYGVGIKGNLFDTMIAHYLLNPDGRHGMDYLSEIYLNYKPVSIETIIGKKGKNQLTF
READLETQTNYAAEDADVTFQLYEIFAPQLQKENLEDLFYKVEMPLMKVLAKMELEGISL
DENWLKQESRDLENDLKQLETKIFELSGEEFNMNSPRQLGEILFEKMQLDPKAKKTKTGQ
YQTSEDVLQKLAPKHEIIPHILEYRTYQKLKSTYVDALPTQIDKDDNRVHTNFSQTTAAT
GRLASVNPNLQNIPIRTLRGQQIRGAFVAGEGKKLISADYSQIELRLIAEIAGEENMIDA
FKKGEDIHASTASKLFKIPLEEVSKTQRSQAKTVNFGIVYGQGAFALAEQTGLSRTEAKQ
MIDAYYENYPKLKEWMAEQVHKARQLGYVETILGRKRHLKDINSNNFVVKGHAERNAVNA
PIQGSAADIIKIAMINIQKKLEEENLETKMLLQVHDELVFESPDNEVETASKLIKTEMES
AFETQVPLLVAVGVGKNWLEAH
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgataattaaaaatgaaaaatctccttcttcacattttcctgctcaaaatcta
catttttccagcgcccatcttccggccaaaaaaactatatttgtccttatgtcacacaac
aacgataaacgcctctttctcatcgatgcttatgcgatgatcttccgtggttattatgct
ctgatacgcaatccgcgtcttacttcaaaagggttggatacctccgccatttttggtttt
accaactctttgattgaactcatccgccgtgaaaggccgtcacatttggccgtggttttc
gatgtgggaagaacgaacgtccgcaccaatgattttgcagattataaagcgaatcgaggt
gaaactccggaagcaattcaggctgcgataccatatattcaccgtattttggaggcgatg
catattccaattttgggcgtggaaggttatgaagctgatgacgtgattgcaaccattgcc
tgtaaagcagaacctgttggctataagatttttatggtgacgcctgataaagatttcggg
cagttggtgacagaaaatatcaagatttacaaacccggactgaaaggcggcgacgtagaa
attctgggagtagatgaaataaaggccaaataccagattgaagatccaaaacaggtcata
gatttccttgcaatgatgggcgattctatcgataatattcccggattggacggtgtgggc
gaaaaaacggccatgaaatttctgaatgaatatggctccattgaaaatcttttggcaaac
actcatcaactcaaaggtaagctcaaagaaaaagtggaagccagcgctgaacgcggatta
ctttccaagaaactggcgaccattatctgcgatgttccgattgaatttgaggaagaatat
tacaacctggatgagcccgattttgaaaaagtacgcgaagtatttgatgaaatcgaattc
cggaggctttatgaaaatctgtaccgggctttcaaacctgaaggtatggaacatgccgta
acggatccaggcaagatctcccggtatgataaagtgaacctttcaaaggacgcttcagaa
acggtacagctggatttattcgccaattttgaagaactggaacagggcacttccagcaaa
aataccattgcggaaaatgaccatctgtatcagctcatcgataatcccatggcacagcga
atgcttgtgaacaacctgatgaagcagcgtgccgtatgttttgatacggaaaccacttct
ttaaacgaaatggaagctgaattggtcgggatgagtttctcttacaaaaaaggactcgct
tactacgttcctttgagtgaaaaacgggatgaagcacgtcaaactttggaaattttcaaa
cctttttttgaaaaagaagacgtgctgaaaattgcccataatcttaagttcgattataaa
attctgaaactgtacggtgttggcatcaaagggaatcttttcgacaccatgattgcgcat
tacctcctgaatcccgacggtagacacggaatggattatctttcagagatttacctgaat
tataaaccggtttccatcgaaacgattatcggaaaaaaaggcaaaaaccaactgactttc
cgtgaggcagacctcgaaacacagaccaattatgctgccgaagatgcagatgtgacgttc
caactttacgaaattttcgcgccccaactccaaaaagaaaacctcgaagatttattttac
aaagtcgaaatgcctctgatgaaagttttggctaaaatggaacttgaagggatttccctc
gacgaaaattggctgaaacaggaaagccgggatttggaaaacgacctgaaacaactcgaa
accaagattttcgaactttccggtgaagaatttaacatgaattcgccgcggcaactcggt
gaaattcttttcgagaaaatgcaactcgacccaaaggccaaaaaaaccaaaaccggacag
taccaaacttccgaagatgtcctgcagaagctggctcccaaacacgaaatcattccgcat
attctggaataccggacttaccaaaaacttaaatcaacttatgtggacgcgcttccaacg
cagattgacaaggatgataaccgcgttcataccaatttttcgcaaaccacggctgcaacc
ggccgtctcgcttcggtgaatccgaatttgcagaatattccgatccggactttacgcggc
cagcaaattcgcggcgctttcgttgcgggagaaggcaaaaaactgatttccgcggattat
tcccagatcgagctgcgcctcattgctgaaattgcgggcgaagaaaacatgatcgatgcc
ttcaaaaaaggggaggatattcacgcttccaccgcttcaaaattatttaaaattccactg
gaggaagtttccaaaacccagcgttcgcaggcaaaaacggtgaatttcggaattgtgtac
ggacagggtgcctttgcgctggcagaacagaccgggctttcacgcaccgaagcaaaacag
atgattgatgcctactacgaaaattatccgaaactgaaagaatggatggcggaacaggtt
cacaaggctcgtcaattgggttatgtggaaaccattttgggcaggaaacgccatttgaaa
gatattaattcaaacaattttgtagtgaaaggccacgcggaaagaaacgcggtaaacgcc
cccattcagggttctgcagcagatattatcaagattgcgatgatcaatattcagaaaaaa
ctggaggaagaaaacctcgaaaccaaaatgctgcttcaggtgcatgacgaactggtcttt
gaatcgcctgataatgaagtggaaaccgcatcaaaactcataaaaaccgaaatggaaagt
gcttttgagacccaggttccgctgctcgtggcagtgggcgtggggaaaaactggcttgaa
gcgcattaa
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