Chryseobacterium taklimakanense: 4412677_02639
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Entry
4412677_02639 CDS
T05512
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ctak
Chryseobacterium taklimakanense
Pathway
ctak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4412677_02639 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctak03019
]
4412677_02639 (rny)
Messenger RNA biogenesis [BR:
ctak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
4412677_02639 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4407
KH-I_KHDC4-BBP
AAA_15
Motif
Other DBs
NCBI-ProteinID:
SNV51226
UniProt:
A0A239XYH7
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All DBs
Position
1:2705857..2707428
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AA seq
523 aa
AA seq
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MTTTAIIIGIVGIVLGAVLGYLFSKSSLNSKAKFILDDAQKNADNLIEKATVQAESIKKE
KQLQAKEKFLELKSQHDADIQSREKKMQEAEKRIKDKEHKLNDELSKTGKLEKDLDRQIA
DYAKKSEILDRKQSELDIITAQKVEILEKISGFSAEEAKAELVEAMKAEAKSRAQAHVQG
IMEEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEE
EIIEVGKRTIIDLGIHGLHPELVKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEVEMTSLLS
PIIQVADGISGARPGARRQVLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVESG
KVSDEQSAQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccgcaataatcattggcattgtcggtatagttttaggagcggtcttagga
tatttgttttctaaaagctctctgaattcaaaggcaaaattcatccttgatgacgcacag
aaaaacgccgacaacctgatagaaaaagccaccgttcaggcagaatccattaaaaaagaa
aagcagctgcaggcaaaagaaaaattccttgaactgaagtcgcagcatgatgctgatatt
cagtccagagaaaagaagatgcaggaagctgaaaaacgcattaaggacaaagaacacaaa
ctgaacgacgaactaagcaaaaccggcaagcttgagaaggatctcgacagacagattgca
gattacgcaaaaaagagcgaaattctggacagaaaacaatcggaactcgatataattacg
gcgcaaaaagtagaaattctggagaagatttctggcttctccgctgaggaggcaaaggct
gaactggtagaggcgatgaaagctgaagccaaatccagagctcaggctcacgtacagggc
atcatggaagaggcgcagatgaacgctaaaaatgaggcaagaaaaatcgtaatccagacg
atccagagaatcggtacggaacaggcgattgaaaattcagtttcagttttcaatatcgag
tctgacgaaattaagggtagaattatcggcagggaaggtagaaatatccgtgctttggaa
gcagcaaccggtgtagaaattatcgtggacgatactccggaagccattttattgtcatgt
tttgatcctgtaagaagagaaatcgcaagactatcccttcacaggcttgtaacggacggc
agaattcaccctgcaagaattgaggaagtggtggagaagacaagaaagcagattgaagaa
gaaatcatcgaagttggtaagagaaccatcattgacctgggaatccacgggctgcatcct
gaacttgtaaagattgttggtagaatgaagtaccgctcctcttacgggcaaaacctgctg
cagcactcgcgcgaagttgcaaatatcgcagcaactatggcagcagaattagggttaaat
gtaaaactagccaaaagagcaggcttacttcacgatatcggtaaagttccggagcaggaa
tctgaacttccgcacgcacttcttggtatgcagtgggcagaaaaatatggggagaatcct
gaagttgtaaatgcgattggtgcacaccatgacgaggttgaaatgacttcacttctttcg
ccaatcatccaggttgccgacggtatttccggagcaaggccgggagcaagacgccaggtt
ctggaatcctatattcagcgtctgaaagaccttgaagccgcagcgctaagttttgatggc
gtttccagcgcttacgccattcaggccggccgtgaactgcgtgttatggtagaaagcgga
aaagtaagcgacgagcaaagcgcgcaactttcttatgatatttcggagaaaatacagaat
gaactgacttacccgggacaggttaaagtaaccgttatccgggaaaccagagcggtgaat
atcgcgagataa
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