Clostridium tetani E88: CTC_00322
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Entry
CTC_00322 CDS
T00112
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTC_00322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_00322
Enzymes [BR:
ctc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CTC_00322
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTC_00322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_28
Helicase_RecD
SLFN-g3_helicase
PIF1
AAA_22
PhoH
DEAD
DNA_pol_lambd_f
HHH_2
nSTAND3
NTPase_1
Ogg-HhH
UvrD-helicase
ABC_tran
CHD1-like_C
AAA_5
AAA_17
UvrD_C
AAA_18
AAA
SRP54
AAA_29
AAA_25
HerA_C
Motif
Other DBs
NCBI-ProteinID:
AAO34963
UniProt:
Q898W6
LinkDB
All DBs
Position
304873..307104
Genome browser
AA seq
743 aa
AA seq
DB search
MEEIQGTVDSIIFRNDENGYVVSRIKEDAKAITTIVGCIPYISEGQNLKLQGGWVIHPQF
GRQFKVESCEEIIPDTKKGIERYLASGVISGIGPVTAKKIVKEFGLETFDILENDIERLK
EIDGIGDKKINIIQEAYKDQKEVRNIMMFFQEYGISINHCLKIYKKFKGESIKIVKENPY
VLTENIAGIGFKTADKIARNLGVDVDSPFRIQSGVNYAVNQFSALGNTCMPIDKLIKEGK
EILNVKEEDIKENILQNAFQGKLRVEIVDGKEYVFSIPYYYCELGVTKNILKLSLYNHKD
LDMTVEEEIKKFEENNNIEFSPSQREAIMGAFLNGVEIITGGPGTGKTTIINCISEIYEN
YGYTVCMGAPTGRAAKRMTEATGRDAKTIHRLLEMGVGEEEVFSKTEETPLECDVVIIDE
ASMIDIMLMNNLLKAISIGTRLIIVGDVDQLPSVGPGNVLRDLIESNCVKIVRLKDIFRQ
SETSAITVNAHKINNGQMPVLNEREKDFFFLKGDSNEDILDVLLALVHKRLPNFNKDWDK
LKHIQILSPMRKGLLGVENLNKNLQMVLNPPSKDKKERKFKEYIFRVGDKIMQTKNNYNI
KWKKIDKYNREEGLGIFNGDIGYIEDIDEENNNMTIIFDEEKRVIYEDIFLDEIDLAYAI
TIHKSQGSEFPAVIIPTFMGPPMLMNRNLLYTGITRAKELVVVVGELKALKFMVDNNRSF
ERYSLLKWRIQNILENFYENDEQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatacaaggtaccgttgattccataatatttaggaatgatgaaaatgggtat
gtagttagcagaattaaggaagatgctaaggctataacaactatagtaggatgcatacct
tatatatcagagggtcaaaacctaaaattacaggggggatgggttatacaccctcagttt
ggtcgacagtttaaagttgaaagctgtgaggaaattattccggatactaaaaaaggtatt
gaaagatatttggcttcaggagtaatttctggaataggaccggtaacagctaaaaagatt
gttaaggaatttggactagaaacctttgatattttagaaaatgatattgaaagattgaaa
gaaatagatggaataggcgataaaaaaataaatataattcaagaagcttacaaagatcaa
aaagaagttagaaatataatgatgttttttcaagagtatggaatatctataaaccattgt
cttaaaatatataaaaaatttaaaggggaatccattaaaatagtaaaagaaaatccatat
gtattaacggaaaatattgcaggtataggatttaaaacagcagataaaatagctagaaat
ttaggagttgatgtagattctccttttagaatacaaagtggtgtaaactatgcagttaat
caattttctgcattgggaaatacttgtatgccaatagataaactaataaaagaaggaaaa
gaaatattaaatgtaaaagaggaagatattaaagaaaacatattgcaaaatgcctttcaa
ggtaaattaagggtggagatagtggatggtaaagaatatgttttctctataccttactac
tattgtgaactaggagtaactaagaacatattaaagctatccttatataaccataaagat
ttagatatgactgtagaggaagagataaaaaaatttgaagaaaataataatatagaattt
tctccttcgcaaagagaagctataatgggagcgtttttaaatggagtggaaataataaca
ggtggacctggaacaggtaaaacaactataataaactgtatttctgagatatatgaaaat
tatggatatacggtttgtatgggggcccctacaggaagggctgccaaaagaatgactgaa
gctactggaagggatgcaaaaactatacacagattattggaaatgggagtaggagaagaa
gaagtattttctaaaacagaagaaacaccattagaatgtgatgtggtaataatagatgag
gcttcaatgatagatataatgcttatgaacaatctattaaaagctatatctataggaact
agacttataatagtgggagatgtagatcagttgccatcagtagggcctggaaatgtatta
agggatttaatagagagtaattgtgttaagatagttaggttaaaagacatatttagacaa
tcagaaactagtgcaataactgtaaatgctcataagataaataatggacaaatgcctgtt
ttaaacgaaagagaaaaagacttcttttttttaaaaggtgactccaatgaagatatatta
gatgttttattagcactagttcataaaagattaccaaattttaataaagactgggataaa
ttaaaacatatacaaatattgagtcctatgagaaaaggactattaggagttgaaaattta
aataaaaatcttcaaatggtgttaaatcccccatcaaaagataaaaaggagagaaaattt
aaggagtacatatttagagtaggggataagataatgcaaactaagaataattataatatt
aaatggaagaagatagacaaatataatagagaagaaggattgggaatattcaatggagat
ataggatatatagaggatatagacgaagaaaataataatatgaccattatttttgatgaa
gaaaagagagtaatttatgaagatatttttttagatgaaatagatttagcatatgccata
actatacataaaagtcaaggtagtgagtttccagcagttattatacctaccttcatggga
ccacctatgcttatgaatagaaatttactgtatacaggaataacaagagcaaaggaatta
gtagttgtagtaggagaattaaaggcattaaaatttatggtagataataatagaagcttt
gaaaggtattctttattaaagtggagaatacaaaacatattagaaaatttttatgaaaat
gatgaacaatag
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