Clostridium tetani E88: CTC_00714
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Entry
CTC_00714 CDS
T00112
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ctc
Clostridium tetani E88
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_00714
Enzymes [BR:
ctc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTC_00714
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CTC_00714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
PDDEXK_1
AAA_19
AAA_12
DUF2175
Cullin_Nedd8
Glyco_transf_28
Motif
Other DBs
NCBI-ProteinID:
AAO35316
UniProt:
Q897M0
LinkDB
All DBs
Position
737202..740645
Genome browser
AA seq
1147 aa
AA seq
DB search
MIRNNFHIIDIDPTFRVADETETILLKQEALEEVFENVYYDGNYTDEFKELLNSFGGKDD
RKLSELVQNLYNFSQSLSWPFKWLNEKVEGFNIEKDYDFGKSIWGTTLKENIKIELEGVK
NQFQRSLNILKEYEEELVDYIEVIEEELNYIKKLLGEHEDNNIIDGLLCFDLSRLPGKRL
KGEVKDTKDKAIKVRDKAKESINKLKEDIGLGYENVEKNMKDLYPRMKCLIELVMKFTME
YDKRKREKNIIDFNDIEHFALEILTDFDKEEKVNPSSVALEYRNKFEEVLVDEYQDSNFV
QEAILNSISRQNNLQSKIEDEKLIIPNLFMVGDIKQSIYRFRQAKPELFLRKYNNYSEEV
SSKYRKIKLFKNFRSRKNIIEGVNFIFKQIMSKNVGELEYGEEEKLNYGADFKELEEGKD
LERDIEIHLMDKEENIEPYTEELGLEEEENIDNIQLEARMVGKVINNLIKDEESNSFMIQ
DKSTKEYRKVQYRDIVILMRATSAMANVFTEELNNVGIPVFADTSSGYFETIEIKTIMSI
LQIVDNPRQDIPMLSVLRCPIFSFSPEDIIDIRLINRDISIYECLEKIKNKEPCLEEEKV
YIDEINEELKERIISFLEKLNLWRDNSIHMSIDQFIWYLYTETGYYGYVGAMPGGVQRQA
NLRLLFERAKQYENTSYKGFFNFISFINKLRNTSGDMGSAKILGENENVVKIMSIHKSKG
LEFPVVIMAGTGRGFNLQDIRKDILFHHQLGFGPEYVDLDKKIKYPTIMKKIIAQKIKLE
TFSEEMRILYVAFTRAKEKLIITGSVKNIEKSMSEWCFTGGEGGKRLPEYELIKSKNYLD
WIMPTLTRHICFQKHIRRQFPEIEIKNGIEDNSCWSLQLWHKKELLEDKLEETKERDIIK
EIEWNKEKSCKNIHEEEVEKRLNWKYKYIKASEIPAKLSVSEIKSRFELLDTGNSDNLIE
ENIFFRKPQFLEEFKKFSSAEIGTFTHLVIQHIDFQRTNSIEDIENQIEELIKREFLTKE
QAKVINIKKIYNFIKSPIVDRIKKSDNVRREESFYIEMSSKDLIPSISEVYKDEKILIQG
VIDLYFQEGNDLIILDYKTDYIEDIEKTKEKYYLQIDYYKKALEKITGKKVKEKYLYLFN
IDRLENI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgataagaaacaattttcatattatagatatagatcctacttttagagtagcagatgaa
accgaaacaatactattaaagcaagaagcattagaagaagtttttgaaaatgtttattat
gatgggaattatacagatgaatttaaagaattacttaattcatttggaggtaaagatgat
agaaaactttcggaattagtccaaaatctttataatttttctcaaagtctttcttggcca
tttaaatggttaaatgaaaaggttgaaggttttaatatagaaaaggattatgattttgga
aaatctatctggggtactacgttaaaagaaaatattaaaatagagttagagggagtaaaa
aatcaatttcaaagatctttaaatatattaaaagaatatgaagaggaattagtagattac
atagaagtaatagaagaggaattaaattatataaaaaaattactaggtgagcatgaagac
aataatattatagatggtttactatgttttgatttatctagacttcctgggaaaaggcta
aaaggagaagtaaaagatacgaaagacaaagcaataaaagtaagagataaagctaaagaa
agtataaataaattaaaagaagatattggattgggatatgaaaatgtagaaaaaaatatg
aaagatctatatcctagaatgaaatgtttaatagaattagttatgaaatttaccatggaa
tatgacaaaagaaaaagagaaaaaaatataatagatttcaatgacatagagcattttgct
ttggagatattaacagattttgataaagaagaaaaagtaaatccatcatctgtagcatta
gaatatagaaataaatttgaagaagtattagtggatgaatatcaagatagtaactttgta
caagaggccatattaaattctatatcaagacaaaataatcttcagagcaaaattgaagat
gaaaaattgattattcctaatctatttatggttggtgatataaagcaaagtatctacaga
tttagacaggcaaaaccagaactattcttaaggaaatataataattattcagaggaagta
agtagtaagtatagaaagatcaagctatttaaaaattttagaagcagaaaaaacataata
gaaggtgtaaattttatatttaaacaaataatgagtaaaaatgtaggagaactagaatat
ggagaagaagaaaaattaaactatggagcagattttaaagagctagaagagggtaaagat
ttagaaagagatatagaaatacatcttatggataaggaagaaaatatagagccctacact
gaagaactagggttagaagaggaagaaaatatagataatatacaactagaagctagaatg
gtgggaaaagtaataaacaacctcataaaagatgaagagagtaattcttttatgattcaa
gataaatctactaaagaatataggaaagtacaatatagagatattgtaatacttatgaga
gctacatcagctatggcaaatgtatttacagaagagttaaataacgtgggaataccagtt
tttgcagatacttcttcagggtattttgaaactattgaaataaaaacaataatgtcaata
ctacaaatagtagataatccaagacaggatatacctatgctatctgtattacgatgccct
atattttctttttcaccagaagatattatagatataagacttataaatagggatataagt
atatatgaatgtttagaaaaaataaaaaataaagaaccttgcttagaagaagaaaaagta
tatatagatgaaataaatgaagaattaaaagaaagaattataagttttctagaaaaatta
aatctatggagagataactctattcacatgagtatagatcaatttatttggtatctatat
acggaaactggatattatggatatgtaggtgctatgccaggaggagtccaaagacaagca
aatctaagattgctatttgaaagagcaaaacaatatgaaaatacaagttataaaggattt
tttaatttcattagttttataaataagttaagaaatactagtggagatatgggaagtgct
aaaatattaggagaaaatgaaaatgtagtaaaaattatgagtatacataaaagtaaggga
ttagaatttccagtagttattatggcaggaacaggcagaggtttcaatcttcaagatata
agaaaagatatattatttcaccatcaattaggatttgggccagaatatgtagatttagat
aagaaaataaagtatccaactattatgaaaaaaattatagcacaaaagataaaattagaa
actttttcagaggaaatgagaatattatatgtggcttttactagagcgaaagaaaaactt
ataataacaggctctgtaaaaaacatagaaaaatccatgagtgaatggtgttttacaggg
ggagaaggaggaaaaagacttccagagtatgagttgattaaaagcaaaaattaccttgat
tggattatgccaacactaactagacatatatgttttcaaaagcatataagaaggcaattt
cctgaaatagaaataaaaaatggaatagaggataattcatgttggagtttacaattatgg
cataaaaaagaattgttagaagataaattagaagaaacaaaagaaagagatataataaag
gaaatagaatggaataaagaaaaaagttgtaaaaacatacatgaagaagaggtagagaaa
aggttaaattggaagtataaatatataaaggcttcagaaatacctgcaaaactatctgta
tcagaaataaaaagtagatttgaactactagatacaggtaattctgacaacttaatagaa
gaaaatattttttttagaaaacctcaatttttagaagaatttaaaaagttttcatcagca
gaaattggaacttttacgcatttagttatacaacatatagattttcaaaggacaaattcc
atagaggatatagaaaatcaaatagaagagcttattaaaagagaatttttaacaaaggag
caagctaaagtaattaatatcaaaaaaatatataattttataaaaagccctatagtagat
agaataaagaagtcggataatgttagaagagaagaatcattttatatagaaatgagtagc
aaagatttaattccaagtatatcagaagtatataaggatgaaaaaatattaatacaaggt
gttatagatctatattttcaagaaggaaacgacttaataatattagactataaaacggat
tatatagaagatatagaaaagacaaaagaaaaatattatttacagatagattattataaa
aaagcattagaaaaaataactgggaaaaaggtaaaagaaaaatatttatatttgtttaat
atagatagattggagaatatttag
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