Clostridium tetani E88: CTC_01116
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Entry
CTC_01116 CDS
T00112
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03030
DNA replication
ctc03430
Mismatch repair
ctc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTC_01116
03430 Mismatch repair
CTC_01116
03440 Homologous recombination
CTC_01116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctc03032
]
CTC_01116
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_01116
Enzymes [BR:
ctc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTC_01116
DNA replication proteins [BR:
ctc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTC_01116
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTC_01116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AAO35695
UniProt:
Q895Z5
LinkDB
All DBs
Position
1183756..1184898
Genome browser
AA seq
380 aa
AA seq
DB search
MFIYAFKISTIKKNIKDQSSNNEVVNEKTEDNLLKQTDYLSNIHELEDDKGREETSDLSS
DEYYKKLCGRDKHINYSKSVFDEFVVIDLETTGLYPVTDKIIEITAIKYKSGQIVEKYNT
LINPKINIPKRATEINNITNNMVKDSPVIEDVLPELLKFIKEYPLVAHNASFDIKFLNAN
LALINREIKNVAIDTLQLSRAMYTFLPNHKLTTIKEHLCISEDNSHRALPDCITTAEIYL
DYCYKANNNLKEFNELEKACFKVIKDMLNKNNRDTEFLKLKHTGNYTDIAYFYPLVRIKV
GDRKQYFLTNIPLEELKEHETEKPSKSENFKSRIHLKSEEDLKPFEEYIIQIFDEKKKSF
EWYKNNIKSSEIEIVKYLAN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttatgcgtttaaaataagtactattaagaaaaatataaaagatcaatcttca
aataatgaagtagttaatgaaaaaacagaagataatctcttaaagcaaaccgattattta
agtaatattcacgaattagaagatgataaagggagagaagaaacatcagacttgtctagc
gatgaatattataaaaaactttgtggaagagacaaacatattaattattctaaaagtgtt
tttgatgaatttgttgtaatagatttagaaactactgggctatatccagttacagataaa
attatagaaattacggcaattaaatataaaagtggacaaatagtagaaaagtataatact
ttgattaatcctaaaatcaatatacctaaaagggctacggaaattaataatataactaat
aatatggttaaagatagccctgtaatagaagatgtcttaccagagttattaaaatttata
aaagagtacccattagttgcacataacgctagctttgatataaaatttttgaatgcaaat
ttagctttaataaatagagaaataaaaaatgttgcaattgatacccttcaattaagtaga
gctatgtatacatttttaccgaatcataaattaaccacgattaaagaacatttatgtata
tcggaagacaattcacatagagctttaccagactgtattacaactgctgaaatatattta
gattattgctataaagcaaataataatttaaaagaatttaatgaattagaaaaagcatgt
tttaaggtaataaaagatatgttaaataaaaataatagagatactgaatttttaaaacta
aaacacacagggaattatacagatatagcatatttttatccattagttagaataaaagtt
ggtgatagaaaacaatattttcttactaacattccacttgaagaattaaaagaacatgaa
acagaaaaaccttctaaatctgaaaattttaaatcaagaatacatttaaaatcagaagag
gatttaaagccatttgaggaatatattatacaaatctttgatgaaaaaaagaaaagtttt
gaatggtataaaaacaacattaaaagttcagaaattgaaatagttaaatatcttgcaaat
taa
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