Clostridium tetani E88: CTC_02090
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Entry
CTC_02090 CDS
T00112
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CTC_02090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctc03019
]
CTC_02090 (recQ)
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02090 (recQ)
Enzymes [BR:
ctc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTC_02090 (recQ)
Messenger RNA biogenesis [BR:
ctc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CTC_02090 (recQ)
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTC_02090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AAO36589
UniProt:
Q892K6
LinkDB
All DBs
Position
complement(2219892..2222012)
Genome browser
AA seq
706 aa
AA seq
DB search
MLQKAKEALSKYFGYDEFRGAQEKVIESILNKKDTVAIMPTGAGKSICYQIPALLTEGIT
IVISPLISLMKDQVDSLKAMGIKATFINSSLNNLEIQERIFNANMGIYDLIYLAPERLES
EGFCNSLNNLDISLIAVDEAHCVSQWGHDFRPSYTRISRFIEGLEKRPIVTAFTATATQT
VKEDILKLLYLKEPEVFVTGVDRENLNFAVIRGENKDEFIYNYLNNNKGKIGIIYTSTRK
DAESLYSKLENKGHKVGVYHAGLGDEQRKKIQEDFSFDNINIIVATNAFGMGIDKSNVRY
VIHYNMPKNMEAYYQEAGRAGRDGEKSECILLFSPRDIQIQKYFIDQGFLPPVRKNNEYN
KLRAMVDYCYTSKCLRAYILEYFDEETNLENCGNCSTCNDDREEKDITIEAQKIFSCVYR
MKESFGVNMIADTLKGSRNKKVLNAGLNRLSTYGIMSEFTQKQISSLINKLIADGYLVTT
DDKFPVVKLQARANNVLKNKEPVYIKITKTKKISKPDNELLEILKDIRKEISQEAGIPPF
MIFHDITLKELSEYMPKDMENFLKIKGVGEKKAEVYGEKFISAICDYTKEKNITAKSNEE
YDMNKKSKEKTHVITYNLYKEGKNIKEISKERNLQTSTIEEHLFKCLNEDMDINIDDLIK
KDYEKIILDAIKKIGGSKLKPIKDALPEEVDYMSIKSVWYKYRKLG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaaaggccaaagaggctttaagtaaatattttggttatgatgaatttagaggt
gctcaagaaaaagtaatagaaagtattttaaataaaaaggatactgtagctattatgcca
acgggagcagggaaatctatttgttatcaaatacctgccctacttacagaaggtataact
atagtaatatctcctttgatttctttaatgaaggatcaagtggattcattaaaggcaatg
ggtataaaggctacttttataaatagttcattaaataacttagaaatacaagagagaata
tttaatgcaaatatgggaatttatgatcttatttatttagcaccagaaagattagaatca
gaaggtttttgtaatagtttaaataatttagatatttcattaatagctgtagatgaggca
cactgtgtatctcaatgggggcatgattttagaccaagttatacaaggattagcagattc
attgaaggattagaaaaaagaccaatagtaacagcatttacagcaacagccacccaaacc
gttaaagaagatatattaaagttattatatttaaaagaaccagaggtttttgtaacagga
gttgatagggagaatctaaattttgctgttatacgaggagagaataaggatgaatttata
tataattatttaaataataataaaggcaaaataggcataatatatacatccactagaaaa
gatgcagaaagcttatatagtaaattagaaaataaaggacataaagttggggtgtatcat
gcaggattaggtgacgaacaaagaaaaaaaattcaagaggatttttcctttgataatata
aatataatagttgcaactaatgcttttggtatgggaatagacaaatctaatgttcgatat
gttatacattataacatgcctaaaaacatggaagcttattatcaagaagcaggtcgtgca
ggtagagatggagagaaaagtgagtgtatattacttttttctcctagagatatacaaatt
caaaaatactttatagatcagggatttttaccacctgtaagaaagaataatgaatacaat
aaattaagggcaatggtggattattgctacacttcaaagtgtttaagagcttatatatta
gaatattttgatgaagaaactaaccttgaaaattgcggaaattgcagtacctgcaatgat
gatagagaagaaaaggatataactatagaagcacagaaaatattttcatgtgtttataga
atgaaggaatcctttggagtaaatatgatagcagatacactaaaaggttcacgaaataaa
aaggtattaaatgcaggacttaatagactgtctacttatggaataatgagcgaattcacc
caaaaacaaatatcatcattaataaataaacttatagcagatggttatctagtaacaaca
gatgataaatttccagtggtaaagctacaagccagggctaataatgttttaaaaaataaa
gaacctgtttacattaaaataacaaagactaaaaagatatcaaagcctgacaatgagttg
ttggaaattttaaaagacataagaaaagaaatatcacaagaggctggaatacctccattt
atgattttccatgacatcactttaaaagaacttagtgaatatatgcctaaggatatggaa
aatttcttaaaaataaaaggtgtaggagagaaaaaagctgaagtatatggagaaaaattt
ataagtgcaatttgtgattatacaaaagaaaaaaatataacagctaaatctaatgaagaa
tatgacatgaataaaaagtctaaggaaaaaactcacgtaataacctataatctctataag
gaaggaaaaaacataaaagaaatttcaaaagagagaaatttacaaacttcaactatagag
gaacatttatttaaatgtttaaatgaagacatggatattaatatagatgatcttattaaa
aaagattatgaaaaaattatattagatgcaattaaaaaaattggtggaagcaagctaaag
ccaataaaagatgcattaccagaagaagtggattatatgtcaataaaatctgtgtggtat
aaatatagaaaattaggatga
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