Clostridium tetani E88: CTC_02103
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Entry
CTC_02103 CDS
T00112
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03030
DNA replication
ctc03410
Base excision repair
ctc03420
Nucleotide excision repair
ctc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTC_02103
03410 Base excision repair
CTC_02103
03420 Nucleotide excision repair
CTC_02103
03440 Homologous recombination
CTC_02103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctc03032
]
CTC_02103
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02103
Enzymes [BR:
ctc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTC_02103
DNA replication proteins [BR:
ctc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CTC_02103
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CTC_02103
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTC_02103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AAO36601
UniProt:
Q892J4
LinkDB
All DBs
Position
complement(2237704..2240352)
Genome browser
AA seq
882 aa
AA seq
DB search
MIGEILMPKRDKLVILDGNSLMNRAFYALPPLTNHEGVHTNAVYGFTNMLLKIKDDIKPD
YIVCTFDKSAPTFRHQAYKDYKAGRKKMPEELREQFPIVKGLLSKLAIEIFEIEGFEADD
LIGTLSKFAEEKDIEVYIVTGDKDALQLASDTTKILFTKRGITEREIYDRQKVVDEMGVT
PTEFIDVKGLMGDPSDNIPGVPGIGEKTALKLIKEYSSVENVLNNIENLSGKKLKENLIE
NSEQAIFSKKLATIMRNVPIDIDLEKIKSKEEYDIEAVREIFIKLQFKSLIDKIPKGENH
KEVEEEEELVYEEIHTIEDLIKLCTEIGNKDEKIYVNFKSTDTSLYSKISLEKLYILFKN
KCYVVNIEERIEENKDKTIEILKTIFEKEAVRVVSHDVKVLSMALKKLDVEFTKALFDLK
IAAYLIDSSKSDYDLSTLIQECLSKIVKDDEEREIRETSLLEKLCANLKEQIINLEMEKL
YYEVELPLAFVLANMELEGFKVDGEMLENIGKKLQREIEKVQKEIYELADEEFNVNSPKQ
LGKILFEKLDLPVIKKTKTGYSTNAQVLEVLEDKHPIISKIGYYRQLTKLYSTYVEGLKN
VIDEDGRIHSSFNQTVTTTGRLSSTEPNLQNIPIKYEMGREVRKVFVPNYENSIILSADY
SQIELRVLAHIADDENLINAFKHHADIHTKTASEVFKVPIDEVTVNMRGNAKAVNFGIVY
GIGDFSLAKDLKISRKEAKGYIDTYFERYPNVKKYMDETIDKAKRDMYVTTILNRRRFIP
EIGNKNKIVKALGERLAMNTPIQGSAADIIKMAMVKVFNVLKERDLKSKIILQVHDELIL
NVYKDELEEIKSIVKDSMENVLPLSVPLEVDINEGENWYDAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttgataggagagatattaatgcctaaaagggataaattagtaatattagatggtaatagt
ttaatgaatagagctttttatgctttaccaccattaactaaccatgagggagttcataca
aatgcagtatatggatttacaaacatgcttttaaaaattaaagatgatataaaaccagat
tatatagtgtgtacctttgataaaagtgcacctacatttagacatcaggcttataaagac
tataaagcaggaagaaagaaaatgccagaggaactaagggagcagtttcctatagtaaag
ggtttgctttctaaattggcaatagaaatttttgaaatagaaggctttgaagctgatgat
ttaataggtactttatctaaatttgcagaagaaaaagatatagaagtttacatagtaact
ggagataaagatgctcttcaattggcatcagatactacaaaaatattatttacaaagaga
ggtataactgaaagagaaatatatgacagacaaaaggtagtagatgaaatgggtgttact
cccactgagtttatagatgtaaaaggacttatgggagatccatctgataatatacctgga
gttcctggtataggagaaaaaactgcactaaagctcataaaagaatatagtagcgtagaa
aatgtattaaataatatagaaaatttaagtggtaaaaaattaaaagaaaatttaatagaa
aatagtgaacaggctatatttagtaaaaaactagctactattatgagaaatgttccaata
gacatagatttggaaaaaattaaatctaaagaagaatatgatatagaagcagtaagagaa
atatttataaaacttcaatttaagtctttaatagataaaatacctaaaggtgaaaatcat
aaagaagtagaagaggaagaagagctagtatatgaagaaattcatactatagaagattta
attaaattgtgtactgaaataggaaataaagatgaaaaaatatatgtaaattttaaaagc
actgatacaagtttatattctaaaatatctttagaaaaactatatatattatttaaaaat
aagtgctatgtagttaatatagaagaaagaattgaagaaaataaagataaaaccatagaa
atattaaaaactatttttgaaaaagaagccgtaagagtagtaagtcatgatgtaaaagtt
ctgtctatggctcttaaaaaattagatgttgaatttactaaagctttatttgatttgaaa
atagcagcatatcttatagattcttcaaagtcagattatgacttgtccacattaatacaa
gaatgtttaagtaaaatagtaaaagatgatgaagaaagagaaataagagaaacttcattg
ttagaaaaattatgtgcaaacttaaaagagcaaattattaatttggaaatggaaaaactt
tattatgaagtagagctaccgctagcttttgttttagccaatatggaattagaaggtttt
aaagtagatggagaaatgctagaaaatataggcaaaaagcttcagagggagatagaaaaa
gttcaaaaggaaatatatgaactagctgatgaagaatttaatgtaaattcaccaaaacaa
ttaggaaaaattttatttgaaaaattagatttacctgttataaagaagacaaaaacagga
tattccactaatgcacaagtcttagaagtcttagaggataaacatcctattataagtaaa
ataggttactatagacaacttacaaaactatattcaacttatgtagaaggattaaaaaat
gttatagatgaagatggaagaatacattcaagctttaatcaaactgtaacaactacaggg
agactttcaagcacagagcctaatcttcaaaatatacctataaaatatgaaatgggaaga
gaagtaagaaaggtatttgtaccaaattatgaaaatagtattatactatcagcggattat
tctcaaatagaattaagagttcttgcacacatagcagatgatgaaaacttaataaatgca
tttaagcatcatgcagatatacatacaaaaactgcatcagaagtttttaaagtaccaata
gatgaagtaacagttaacatgagaggaaatgctaaggcagtaaactttggaatagtttat
ggaataggagattttagtttagctaaagacttaaaaatatctagaaaagaagcaaagggg
tatatagatacttattttgaaagatatcctaatgttaaaaaatatatggatgaaactata
gataaagctaaaagagatatgtatgttacaacaattttaaacagaagaagattcatacct
gaaatagggaataaaaacaaaatagtaaaggctttaggggaaagattagccatgaataca
cctattcaaggaagtgccgctgatataataaaaatggctatggtaaaagtctttaatgta
cttaaagaaagagatttaaaaagtaaaataatattacaagttcacgatgagcttatatta
aatgtttataaagatgaattagaagaaattaaaagtatagtcaaagactctatggaaaat
gtattaccacttagtgtaccacttgaagttgatataaatgaaggagaaaattggtatgat
gctaagtga
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