Clostridium tetani E88: CTC_02395
Help
Entry
CTC_02395 CDS
T00112
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03420
Nucleotide excision repair
ctc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTC_02395
03430 Mismatch repair
CTC_02395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02395
Enzymes [BR:
ctc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTC_02395
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTC_02395
MMR (mismatch excision repair)
Other MMR factors
CTC_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
PcrA_UvrD_tudor
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
DUF806
Motif
Other DBs
NCBI-ProteinID:
AAO36866
UniProt:
Q891H9
LinkDB
All DBs
Position
complement(2533510..2535429)
Genome browser
AA seq
639 aa
AA seq
DB search
MGYNKNFAIYDSYDQKVLIKECIKELSLNEKDFDDRSLINKIGQQKDNLISPEKFRREIG
DNYRLGKIANVYELYQKKLKNNNALDFDDLIYKTVELFKKNEEILEFYQDKFKYIMVDEY
QDTNKSQYELVKLLALKHKNICVVGDDDQCIYAWRGADIRNILDFEKDYPQVKTIKLEEN
YRSMSNILSAANDVIKNNSNRKVKKLRTSNSQGEKVKVYRANSDIEEAQFVINEIKKLIK
EENRTPKDFSILYRTNAQSRIFEEVFMRNKIPYKIVGGLKFYDRKEIKDIMAYLKLINNP
LDDVSLKRIINVPKRGIGKSSIEKIENFSREMEECIYSTLLDIDSIGIANRAASSVNKFV
SLINSFIRKKDEVKVSVLIQEIIEYTGYMKELQDSKNIEDLSRIENLKELVSAAVDFEIS
SEDKTLSAFLEQIALVSDIDNYDEQSDAVVLMTVHSAKGLEFPAVFMVGMENGIFPGTQS
LDDIDEMEESRRLCYVGITRAKEKLYMTSAERRMVFGRTVFYPESDFIDEISRELKENLC
ERKSVKNNFVSEKSRYFNDNLKNFNNNIKLQGIIESKKEEKNILREEEIKLGTKVKHSKF
GLGTIVSISKVANDVKLTIAFDKMGVKILMLSVAPLEAV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgggatataataaaaattttgccatatacgatagctatgatcaaaaagttttaattaaa
gaatgtataaaagagttaagtttaaacgaaaaggattttgatgatagaagtttaataaat
aaaataggacaacaaaaggataacttaatatccccagaaaaatttagaagagaaattgga
gataattatagattaggaaaaatagcaaatgtatatgaattatatcaaaaaaaattaaag
aacaataatgctctggactttgatgatttaatatataaaactgtggaattatttaagaaa
aatgaagagatcttagaattttatcaagataaattcaaatacataatggttgatgaatat
caggacactaataaatcacaatatgaattagtaaaattactagcgttgaaacataaaaac
atctgtgttgtaggtgatgatgatcaatgtatatatgcttggagaggagcagatataaga
aatatattggattttgaaaaagattatccacaagtaaaaacaataaaattagaagaaaac
tatagatccatgagtaatattttaagtgcagcaaatgatgtaataaaaaataattctaat
agaaaagttaaaaagttaagaactagtaatagtcaaggagaaaaagttaaagtatacaga
gctaactctgatattgaagaagctcaatttgtaataaatgaaattaaaaaattaattaaa
gaagagaatagaactcctaaggatttttctatattgtatagaactaatgctcaatcacgt
atttttgaagaggtgtttatgagaaataaaataccttataaaatagttggtggacttaaa
ttctatgatagaaaagaaatcaaagatataatggcatatttaaaacttataaataatcca
ttagatgatgttagtttaaaaagaattattaatgttcctaagcgtggtataggaaaaagc
agtatagaaaaaatagagaatttttcaagagaaatggaggagtgtatatatagtacttta
ttagatatagactctataggcatagctaatagagctgcatcctctgtaaataaatttgta
agtttaataaacagctttataagaaaaaaagatgaagtgaaagtatctgtgttaattcaa
gaaataatagaatacacaggatatatgaaagaattgcaagattctaaaaatatagaggat
ttaagtagaatagaaaatttaaaggagcttgtgtctgcagcggtagattttgaaatatcc
tcagaagacaaaacattatcagcttttttagagcaaatagctcttgtgtcagatatagat
aattatgatgaacaatcagatgctgtagttcttatgacagttcatagtgcaaaaggttta
gaatttccagctgtgtttatggttggtatggaaaatggaatatttccaggaacacaatct
ttagatgatatagatgagatggaagaatctagacgtttatgttatgtgggaattactaga
gcaaaagaaaaactgtatatgacatcagcggaaagaagaatggtgtttggacgaactgtt
ttttatcctgaatcagactttatagatgaaatatctagagaattaaaagagaatctatgc
gaaagaaaaagtgtgaaaaataattttgtgtctgagaaatcaagatattttaatgataat
ttaaagaatttcaacaacaatattaaattacaaggcataatagaaagtaagaaagaagaa
aaaaatatattaagagaagaagaaataaaattgggaacaaaagttaaacacagcaaattt
ggtttaggaactatagttagtataagtaaagttgcaaatgatgtaaaattaaccattgct
tttgataaaatgggtgttaaaatattaatgttaagtgttgctcctttagaagcagtataa
DBGET
integrated database retrieval system
